Gene Shewmr4_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2529 
Symbol 
ID4253100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3010867 
End bp3011169 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content45% 
IMG OID638119164 
Productbranched-chain amino acid transport 
Protein accessionYP_734657 
Protein GI113970864 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGT TAATGATTTT TTCAATGGCG GCGGTGGTAT TTATCAGTCG GCATTTACTG 
CTCGAGCCAA AACTGCCGCT AAGGCTGAGT AAAAATACCC AGACCTTTTT GAGTTATTCG
GCGCCCGCCG TACTCACGGC CATCTTTGCA CCTATCGTAT TTGTGCAGGA GGGAAAACTC
GATTTAAGCT TAGATAACAG CTACTTGATA TGCGCTGTGG TCGCAACAGT ATTAGCATTT
GTCACGCGTA ATACCCTATT GACCACAGTG CTGAGCATGG GACTTTTCTT TGCTATTCAT
TAA
 
Protein sequence
MIWLMIFSMA AVVFISRHLL LEPKLPLRLS KNTQTFLSYS APAVLTAIFA PIVFVQEGKL 
DLSLDNSYLI CAVVATVLAF VTRNTLLTTV LSMGLFFAIH