| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2515 |
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| Symbol | |
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| ID | 4253086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2993472 |
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| End bp | 2994974 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119150 |
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| Product | vibriolysin |
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| Protein accession | YP_734643 |
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| Protein GI | 113970850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.67369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00118285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTCT ATCTCTTACC TTCTGTACTC AGTATGTGCG TTGCGGCAAG CCTTCAGGCG
CAGGCCGCTG AGTTCAACGT TAATCACGGG CAATCCCTCT CGGCAGCGGC AGGGTTGAGC
CAAAAACACA GCTTTAAAGA GGTCAAAACG GTAACGCTCA ATAAAGGTCA AAGCAAAACG
AAAGCGTTGC AGTATTTCGA TGGTGTGCTG GTGTATGGCC ATCATCTGGT TGTGAGCACG
GATGATACAG AACAAAGTGC CATGGGGGAT GTGGCACAAA TTGCGGATGA TTTTTCGGTA
GCGGCAGGGA TTTCTCAAGG GCAGGCGATT GCGGCGTTGA ATCGGTTATA TCCAGGTTCG
GCGGCAACCG GTAAAAAGGA TGTGCAACTG GTGATCTTGA TGACCGAGGA TAACCCGAGG
TTAGTGTATC GGGTGTCTTA CTTAAGCGAT CAAACCGATG CGTTATCTCG GCCGACAGGT
TTTGTCGATG CGCAAACCGG CGAGGTGCTT GAGCACTGGA ATGAGATCAT GACCGCCAAG
AATAACGTGG GTAAACCCGG CGGTGGTGGA GGCGGTTCAG GTGGTAGCAG CACTCCTTTT
GATGCAACGG GTCCTGGCGG CAATACCAAA ATCGGTGGTT ACTACTACGG CGATGCTTAC
GGTAAACTTA AGGTGAGTGA GTCTAATGGT ACATGTACTA TGACCAACGC CAATGTGAAA
ACCGTGAACA TGGCGAACTC GACTCGTCGA GGTTCTGTGT TCACCTTTAC TTGTCCCGAG
AATACTTATC AGATGGTCAA TGGTGCTTAT TCGCCTTTAA ATGATGCCCA CTATTTCGGT
GGTGTTATTT TTAATATGTA TAAGGAATGG TATAACACCA AACCATTAAG TTTCCAGTTG
GAGATGCGGG TGCATTATGG CCGTAACTAT GAAAATGCCT TCTGGGACGG CTCGGCTATG
TCCTTCGGTG ATGGTGCGAG TTACTTCTAT CCCCTCGTGA GTTTGGACGT TTCCGCCCAT
GAAGTGAGCC ACGGCTTTAC CGAGCAGAAC TCGGGCTTAA ATTACAGCGG CCAGTCCGGC
GGTATCAATG AAGCGTTTTC GGATATTGCC GGTGAGGCGG CCGAGTTCTA CATGCGTGGC
AGTAACGACT GGAAAGTGGG CTACGACATA GTTAAAGGCA GTGGTGCACT GCGTTATATG
GATAATCCGC CTAAGGATGG CCGCTCAATC GACAATGCTG CCAATTACAC TAGTTCCATG
GATGTGCATT ATTCCTCAGG GGTGTTTAAC AAAGCTTTTT ACACTCTGGC TACCAAGAAT
GGTTGGAATA CTCGCAAGGC GTTCGATGTG TTTGTGTTAG CGAACCAGCT GTATTGGACA
CCAACCTCGA CCTTTAACCA AGCGGCCTGT GGCGTGCAGC AGGCGGCGAG TGCCAATGGT
TCTGCCTATC CTGTGGCGGA TGTGGCTGCG GCATTTGCCG TGGTGGGCGT GAGTTGCCAA
TGA
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| Protein sequence | MKVYLLPSVL SMCVAASLQA QAAEFNVNHG QSLSAAAGLS QKHSFKEVKT VTLNKGQSKT
KALQYFDGVL VYGHHLVVST DDTEQSAMGD VAQIADDFSV AAGISQGQAI AALNRLYPGS
AATGKKDVQL VILMTEDNPR LVYRVSYLSD QTDALSRPTG FVDAQTGEVL EHWNEIMTAK
NNVGKPGGGG GGSGGSSTPF DATGPGGNTK IGGYYYGDAY GKLKVSESNG TCTMTNANVK
TVNMANSTRR GSVFTFTCPE NTYQMVNGAY SPLNDAHYFG GVIFNMYKEW YNTKPLSFQL
EMRVHYGRNY ENAFWDGSAM SFGDGASYFY PLVSLDVSAH EVSHGFTEQN SGLNYSGQSG
GINEAFSDIA GEAAEFYMRG SNDWKVGYDI VKGSGALRYM DNPPKDGRSI DNAANYTSSM
DVHYSSGVFN KAFYTLATKN GWNTRKAFDV FVLANQLYWT PTSTFNQAAC GVQQAASANG
SAYPVADVAA AFAVVGVSCQ
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