Gene Shewmr4_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2497 
Symbol 
ID4253068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2968253 
End bp2969107 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID638119132 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_734625 
Protein GI113970832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000101338 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0187987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AAATAATCGA CGGCAAGGCG ATTGCTCAAT CCATCCGCAC ACAACTTCGC 
GAAAAAGTAA CCGCCCGCAA AGAGGCAGGA CAACGCGTAC CAGGTTTAGC CGTCATTCTC
GTGGGAGCCG ACCCCGCTTC TCAGGTTTAT GTTGGTAGTA AACGTAAAGC CTGTGAAGAA
GTGGGATTTA TTTCTCGCTC TTACGATCTC GATACCAGTT ATACCGAAGA AGCATTATTA
GCCCTTATCG ACGAACTCAA TGATGATCCG ACGATCGACG GTATCTTAGT GCAGCTCCCT
CTACCTGCGC ATATCGAAGA CTCTAAAGTC ATTGAGCGTA TTCGCCCCGA TAAAGATGTC
GACGGTTTTC ACCCTTATAA CGTTGGCCGT TTAGCCCAGC GCATTCCCGT ATTACGTTCA
TGTACCCCCA TGGGGATCAT GACCTTAATC AAATCAACGG GTGTTGATAC CTATGGATTA
GATGCCGTTG TGGTAGGCGC ATCAAACATT GTCGGCCGCC CAATGACACT GGAGCTATTG
CTTGCGGGCT GTACCACAAC CACATGCCAT CGCTTTACAA AAAATCTAGA ACAAAAAATC
CGTCAGGCAG ATTTAGTGGT GGTTGCCGTG GGTAAACCTG GCTTTATCCC AGGTGAATGG
ATTAAACCGG GCGCCATTGT TATCGATGTG GGTATTAACC GCTTAGAAAA CGGTACCTTA
GTGGGCGACG TGCAATATGA TGTTGCTGCG CAAAACGCCA GCTTTATCAC CCCAGTCCCT
GGTGGTGTTG GCCCTATGAC GATTGCCAGC CTACTTGAAA ATACCCTGTA TGCGGCAGAG
CAATATCACG ACTAA
 
Protein sequence
MTAQIIDGKA IAQSIRTQLR EKVTARKEAG QRVPGLAVIL VGADPASQVY VGSKRKACEE 
VGFISRSYDL DTSYTEEALL ALIDELNDDP TIDGILVQLP LPAHIEDSKV IERIRPDKDV
DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI KSTGVDTYGL DAVVVGASNI VGRPMTLELL
LAGCTTTTCH RFTKNLEQKI RQADLVVVAV GKPGFIPGEW IKPGAIVIDV GINRLENGTL
VGDVQYDVAA QNASFITPVP GGVGPMTIAS LLENTLYAAE QYHD