Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2497 |
Symbol | |
ID | 4253068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2968253 |
End bp | 2969107 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119132 |
Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
Protein accession | YP_734625 |
Protein GI | 113970832 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000101338 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0187987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCC AAATAATCGA CGGCAAGGCG ATTGCTCAAT CCATCCGCAC ACAACTTCGC GAAAAAGTAA CCGCCCGCAA AGAGGCAGGA CAACGCGTAC CAGGTTTAGC CGTCATTCTC GTGGGAGCCG ACCCCGCTTC TCAGGTTTAT GTTGGTAGTA AACGTAAAGC CTGTGAAGAA GTGGGATTTA TTTCTCGCTC TTACGATCTC GATACCAGTT ATACCGAAGA AGCATTATTA GCCCTTATCG ACGAACTCAA TGATGATCCG ACGATCGACG GTATCTTAGT GCAGCTCCCT CTACCTGCGC ATATCGAAGA CTCTAAAGTC ATTGAGCGTA TTCGCCCCGA TAAAGATGTC GACGGTTTTC ACCCTTATAA CGTTGGCCGT TTAGCCCAGC GCATTCCCGT ATTACGTTCA TGTACCCCCA TGGGGATCAT GACCTTAATC AAATCAACGG GTGTTGATAC CTATGGATTA GATGCCGTTG TGGTAGGCGC ATCAAACATT GTCGGCCGCC CAATGACACT GGAGCTATTG CTTGCGGGCT GTACCACAAC CACATGCCAT CGCTTTACAA AAAATCTAGA ACAAAAAATC CGTCAGGCAG ATTTAGTGGT GGTTGCCGTG GGTAAACCTG GCTTTATCCC AGGTGAATGG ATTAAACCGG GCGCCATTGT TATCGATGTG GGTATTAACC GCTTAGAAAA CGGTACCTTA GTGGGCGACG TGCAATATGA TGTTGCTGCG CAAAACGCCA GCTTTATCAC CCCAGTCCCT GGTGGTGTTG GCCCTATGAC GATTGCCAGC CTACTTGAAA ATACCCTGTA TGCGGCAGAG CAATATCACG ACTAA
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Protein sequence | MTAQIIDGKA IAQSIRTQLR EKVTARKEAG QRVPGLAVIL VGADPASQVY VGSKRKACEE VGFISRSYDL DTSYTEEALL ALIDELNDDP TIDGILVQLP LPAHIEDSKV IERIRPDKDV DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI KSTGVDTYGL DAVVVGASNI VGRPMTLELL LAGCTTTTCH RFTKNLEQKI RQADLVVVAV GKPGFIPGEW IKPGAIVIDV GINRLENGTL VGDVQYDVAA QNASFITPVP GGVGPMTIAS LLENTLYAAE QYHD
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