| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2496 |
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| Symbol | tig |
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| ID | 4253067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2966071 |
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| End bp | 2967375 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119128 |
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| Product | trigger factor |
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| Protein accession | YP_734624 |
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| Protein GI | 113970831 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000377099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.020755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAGC AACCCAAGGC CTAGAGCGTC GCCTGACCAT TTCTGTTCCT
GCTGAACAAA TTGAAAAACT GGTTAAAGAC AGTTTACAAC GTGAAGCTAA GCGTGCTCGT
ATCCCAGGTT TCCGTCCTGG CAAAGTGCCT GTTACTGTAA TCAACAAGCG TTATGGCGCA
GCTATTCGTC AAGACATCAC TGGTGAAGTG ATGCAACGTA ATTTTATCGA AGCGATCATC
GCTGAGAAAT TAAACCCAGC TGGCGCACCC ACTTTCGTAC CTGGTGCGAC TGACGGTGAA
AAATTCGAAT TCGTAGCGAC TTTCGAAATC TACCCAGAAG TTGAGCTGAA AGGTTTAGAT
GCAATCGAAG TAGAACAACC AAAAGCGTCT GTAACCGATG CTGACGTAGA CAGCATGATC
GAAACCTTAC GTAAGCAACA CGCGACTTTC GCAGCTGTTG AGCGTGAAGC GGCTGACGGC
GACAAAGTGA AAATGAACTT TGTTGGTTCA GTTGACGGTG TTGAATTCGA AGGCGGTAAA
GCTGACGATT TCGAACTGCA ATTAGGCAGC GGCCGTATGA TCCCAGGTTT TGAAGCGGGT
ATCTTAGGTC ACAAAGCCGG TGAAGAATTC GTTATCGACG TGACTTTCCC AGAAGAATAT
CACGCTGAAA ACTTAAAAGG TAAAGCGGCT AAGTTTGCTA TCACTTTAAC TGAAGTGTTA
GCGGCTAACT TACCAGAAGT AAACGATGAG TTTGCTGCAT TATTCGGTAT CAGCGAAGGC
GGCTTAGAAG CGCTGAAAAC TGAAATCCGT AAGAACATGA ACCGTGAACT AGAGCAAGCG
TTAAAAGCTA ACGTGAAAGA GCAAGTGATC AACGGTCTGT TAGCTAACAA CGACATCGAA
CTGCCAAAAG CACTGATCGA TGGCGAAGTT AACGTACTGC GTCAACAAGC GATGCAACGT
TTCGGCGGTC AAACGGCTAA CATGCCAGAA CTGCCAGCGG AATTATTCAC TGAGCAAGCG
GCTCGTCGCG TGAAAATCGG TCTGTTATTA GGCGAAGTCA TCAAGACTAA CGAGCTAAAA
GCTGAAGATG AACGAGTACA AGCTCTGATC GCTTCTATGG CTTCTGCATA CGAAGATCCA
AGTGAAGTTG TTGCGTATTA CAACAGCAAC AAAGAGCTGA TGCAAAACAT GCGCAACGTT
GCGCTTGAAG AGCAAGCTGT TGAAGCACTG CTTAAATCTG CTAAAGTGAC CGAAAAAGAA
GTCGCTTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CATAA
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| Protein sequence | MQVSVEATQG LERRLTISVP AEQIEKLVKD SLQREAKRAR IPGFRPGKVP VTVINKRYGA
AIRQDITGEV MQRNFIEAII AEKLNPAGAP TFVPGATDGE KFEFVATFEI YPEVELKGLD
AIEVEQPKAS VTDADVDSMI ETLRKQHATF AAVEREAADG DKVKMNFVGS VDGVEFEGGK
ADDFELQLGS GRMIPGFEAG ILGHKAGEEF VIDVTFPEEY HAENLKGKAA KFAITLTEVL
AANLPEVNDE FAALFGISEG GLEALKTEIR KNMNRELEQA LKANVKEQVI NGLLANNDIE
LPKALIDGEV NVLRQQAMQR FGGQTANMPE LPAELFTEQA ARRVKIGLLL GEVIKTNELK
AEDERVQALI ASMASAYEDP SEVVAYYNSN KELMQNMRNV ALEEQAVEAL LKSAKVTEKE
VAFEEFMNKA TGRA
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