| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2495 |
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| Symbol | clpP |
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| ID | 4253066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2965373 |
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| End bp | 2965981 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119127 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_734623 |
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| Protein GI | 113970830 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000509857 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0295055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATAATG CGTCAGACAT ACAAAGTGCT TTAGTGCCTA TGGTGATCGA ACAGACGGCT
AAGGGTGAAC GCTCATTCGA TATTTATTCT CGTCTGTTAA AAGAGCGGAT TATCTTTTTA
GTGGGTCAAG TTGAAGAGCA TATGGCGAAT CTGATTGTGG CGCAGTTGCT ATTCCTCGAA
TCAGAAAGCC CAGATAAAGA TATCTTCTTA TATATCAACT CACCCGGTGG CTCAGTCACT
GCAGGTATGG CGATTTACGA TACCATGCAA TTTATTAAGC CAAACGTCAG CACTGTGTGT
ATTGGTCAAG CGGCCAGCAT GGGCGCGTTT TTATTAGCCG GTGGTGAAAA GGGCAAGCGT
TTCTGCTTAC CTAACTCACG CGTGATGATC CACCAACCAC TGGGTGGATT CCAAGGTCAG
GCTTCTGATA TCGCTATTCA TGCCCAAGAG ATTTTAGGCA TCAAGCATAA ACTGAACCTG
ATGTTGTCAG AGCACACTGG CCAGCCACTC GAATTGATTG AACGTGATAC CGATCGCGAC
AACTTCATGA GTGCGACTCA AGCGGTTGAA TATGGTTTAG TTGACGCAGT GATGACTAAA
CGCGGCTGA
|
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| Protein sequence | MHNASDIQSA LVPMVIEQTA KGERSFDIYS RLLKERIIFL VGQVEEHMAN LIVAQLLFLE
SESPDKDIFL YINSPGGSVT AGMAIYDTMQ FIKPNVSTVC IGQAASMGAF LLAGGEKGKR
FCLPNSRVMI HQPLGGFQGQ ASDIAIHAQE ILGIKHKLNL MLSEHTGQPL ELIERDTDRD
NFMSATQAVE YGLVDAVMTK RG
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