Gene Shewmr4_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2493 
Symbol 
ID4253064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2961503 
End bp2963860 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content50% 
IMG OID638119125 
ProductLon-A peptidase 
Protein accessionYP_734621 
Protein GI113970828 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000173516 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0963956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAG AGCGTGAAGC GCATATCGAA CTCCCCGTGC TACCACTGAG AGATGTGGTG 
GTCTATCCCC ATATGGTAAT TCCGTTGTTC GTTGGCCGAG AAAAATCGAT TCGTTGTCTC
GAAACGGCAA TGGCCCAGGA TAAACAAATT ATTTTAGTCG CTCAGCGTGA CGCTGAGTTA
GACGAGCCGA CCAAAGACGA TATCTTTGAA GTGGGCACTG TAGCGTCTAT TCTGCAACTC
CTTAAACTGC CTGACGGTAC GGTCAAAGTG CTGGTCGAAG GTGGTCGCCG CGCCCGTATT
ACGCGTTACA CTCAGGAAGC AGATTTCTTT GTGGCTAAGG CAGAGTACCT TGAGTCTGAG
CCTTTAGAAG ACAAAGAAGA GGAAGTCTTG GTTCGCAGCG CGATTGGCCA ATTCGAAGGC
TATATCAAGC TCAATAAGAA GATCCCACCA GAAGTGCTTA CCTCGCTTTC TGGCATCGAT
GAAGCGGCGC GCCTCGCCGA TACCATGGCG GCTCATATGC CACTCAAGCT TGAAGACAAA
CAGTCTGTGC TTGAGATGAC TAACATCGGT GAGCGTCTGG AATATTTAAT GGCGATGATG
GAGTCGGAAA TTGACCTGCT ACAGGTCGAG AAACGTATCC GTACCCGCGT TAAAAAGCAG
ATGGAAAAGA GCCAGCGTGA GTATTATCTG AACGAACAGA TGAAAGCCAT CCAAAAAGAA
TTGGGTGACT TAGACGAAGG CCACGACGAG TTTGAAGTCT TAAATCGTAA GATTGAAGAA
GCTAACATGC CGAGCGATGC CAAAGAGAAA GCCGTCGCCG AGCTGAATAA ATTACGCATG
ATGTCACCTA TGTCTGCAGA AGCGACCGTG GTTCGCAGCT ATGTTGATTG GATGACCTCA
GTGCCTTGGA GCCAACGCTC TAAAATCAAA CGCGATTTAG CCAAAGCCCA AGAAGTGCTG
GATACCGATC ACTACGGTCT GGAAAAGGTC AAAGACCGCA TTCTGGAATA CTTGGCAGTG
CAGAGCCGTG TGCGTCAACT TAAGGGCCCT ATCCTGTGCT TAGTCGGCCC ACCAGGTGTG
GGTAAAACCT CATTAGGTCA ATCGATTGCG AAAGCAACTG GTCGTAAGTA TGTGCGTGTT
GCCTTAGGCG GTGTGCGTGA TGAAGCGGAG ATCCGTGGTC ATCGCCGTAC TTACATTGGC
TCAATGCCGG GTAAAGTCAT TCAAAAGATG GCGAAAGTGG GCGTGAAAAA CCCCTTATTC
CTGCTCGATG AAATCGACAA AATGAGCTCG GATATGCGTG GCGACCCAGC GTCAGCACTG
TTAGAGGTGC TTGACCCTGA GCAAAACGCG ACCTTTAACG ACCATTACCT CGAAGTCGAC
TACGACTTAT CCGATGTGAT GTTCGTGGCG ACCTCGAACT CGATGAATAT TCCAGGTCCG
CTTCTGGACC GCATGGAAGT GATTCGTCTG TCGGGTTACA CCGAAGATGA GAAGCTCAAT
ATTGCTAAGC AGCATTTACT GACCAAGCAA ATCGAGCGTA ACGGTCTTAA AGCGAACGAA
ATTCATATCG AAGATAGTGC GATAGTCGGC ATTATTCGCT ACTACACCCG TGAAGCCGGT
GTGCGTGCAC TCGAGCGCGA ATTGTCGAAG ATTTGCCGCA AGGTCGTGAA AATGATCCTG
CTGGATAAAT CCATCAAGTC AGTCACAGTG ACCGCGGACA ATCTCAAGTC TTTCCTCGGT
GTGCAGCGTT TTGACTATGG CAAAGCGGAA TCGAACAACC AAATCGGTCA AGTTACTGGT
TTGGCGTGGA CCGAAGTGGG CGGCGATCTG CTCACCATTG AAGCGACATC AGTACCCGGC
AAAGGCAAGT TGACCTATAC AGGCTCACTT GGCGATGTGA TGCAAGAGTC GATTCAAGCG
GCGATGACGG TCGTACGTGC CCGTGCGGAA CAATTAGGTA TCAACGGCGA CTTTTATGAG
AAGCGTGATA TCCATGTTCA CGTGCCAGAA GGGGCGACGC CAAAAGATGG TCCATCTGCT
GGCGCGGCAA TGTGCACTGC TTTAGTGTCT AGCCTAACGG GGAACCCTGT GCGCGCCGAT
GTGGCGATGA CGGGGGAAAT TACCTTACGC GGAGAAGTGT TACCAATTGG TGGTTTAAAA
GAAAAACTGC TCGCGGCACA CCGTGGTGGC ATTAAATTGG TATTAATTCC AAAAGAAAAC
GAACGTGATC TGGAAGAAAT TCCTGCCAAT GTGATTGCAG ATTTGGAAAT TCGTCCCGTG
CGTTGGATCG ATGAAGTGTT AAAACTGGCG CTGGAAAGAC CGGTTGAAGG CTTCGAAGTG
GTTAAAAACT TGGCATAA
 
Protein sequence
MTLEREAHIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ETAMAQDKQI ILVAQRDAEL 
DEPTKDDIFE VGTVASILQL LKLPDGTVKV LVEGGRRARI TRYTQEADFF VAKAEYLESE
PLEDKEEEVL VRSAIGQFEG YIKLNKKIPP EVLTSLSGID EAARLADTMA AHMPLKLEDK
QSVLEMTNIG ERLEYLMAMM ESEIDLLQVE KRIRTRVKKQ MEKSQREYYL NEQMKAIQKE
LGDLDEGHDE FEVLNRKIEE ANMPSDAKEK AVAELNKLRM MSPMSAEATV VRSYVDWMTS
VPWSQRSKIK RDLAKAQEVL DTDHYGLEKV KDRILEYLAV QSRVRQLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKVIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNA TFNDHYLEVD YDLSDVMFVA TSNSMNIPGP
LLDRMEVIRL SGYTEDEKLN IAKQHLLTKQ IERNGLKANE IHIEDSAIVG IIRYYTREAG
VRALERELSK ICRKVVKMIL LDKSIKSVTV TADNLKSFLG VQRFDYGKAE SNNQIGQVTG
LAWTEVGGDL LTIEATSVPG KGKLTYTGSL GDVMQESIQA AMTVVRARAE QLGINGDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRAD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG IKLVLIPKEN ERDLEEIPAN VIADLEIRPV RWIDEVLKLA LERPVEGFEV
VKNLA