Gene Shewmr4_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2489 
Symbol 
ID4253060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2957200 
End bp2958402 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content49% 
IMG OID638119121 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_734617 
Protein GI228898760 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.753328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0117707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCA AACCCAAAAT TCGTGGATTC ATTTGTACCA CTACTCATCC CGTTGGTTGT 
GAAGCTAACG TTCAAGAACA AATTGCCTTA ACCAAAGCGA AAGGCAAGAT CGCCAACGGG
CCGAAGAAAG TCCTCGTCGT TGGTTCATCC AGTGGTTATG GCCTGTCTTC ACGCATTGCC
GCCGCCTTTG GTAGCGATGC TGCAACCATT GGTGTGTTCT TCGAAAAGCC GGGTACTGAA
TCTAAACCCG GAACAGCAGG CTGGTATAAC TCAGCTGCTT TCGACAAGTT TGCCAAAGCT
GAAGGTTTGT ACTCTAAGAG CATCAACTGT GATGCCTTCA GCCATGAAGC TAAGCAAAAA
GTTATCGAGC TTATCAAGCA AGACTTAGGT CAAGTGGACA TGGTGGTCTA TTCATTAGCA
TCACCCGTGC GCAAACTGCC TGACTCTGGT GAGCTAGTGC GTTCTGCGCT AAAGCCAATC
GGTGAAGTGT ATACCGCGAC CGCCGTAGAT ACGAACAAAG ACTGCATTAT CGAAGCCACC
GTTGAGCCTG CCACTGAGCA AGAAATTGCC GATACTGTCA CAGTGATGGG CGGTCAAGAT
TGGGAACTGT GGATTAACGC ACTCGCCGAG GCTGGTGTAT TAAGCGACAA TTGCAAAACC
GTTGCCTACA GCTATATCGG CACTGAGCTA ACCTGGCCAA TCTACTGGCA CGGCGCATTA
GGTCAAGCCA AGATGGACTT AGATCGCGCG GCTAAAGCCT TAAATGATAA GCTTGCAACC
AAAGGTGGCA GCGCTAACGT CGCAGTGCTG AAGAGCGTTG TGACTCAAGC CAGCTCTGCC
ATCCCGGTGA TGCCACTGTA TATTGCGATG GTATTTAAGA AGATGCGCCA AGAAGGCCTG
CACGAAGGCT GTATGGAGCA AATCTATCGC ATGTTCAGTG AGCGTCTGTT CCGTGCCGAT
GGTGCAAAAC CAGAGACTGA CAGCAACAAC CGTCTGCGTT TAGATGATTG GGAACTACGT
GAAGATATCC AGCAGCACTG CCGTGATCTG TGGCCGCAAG TGACCACCGA AAACCTGTCA
GAACTGACCG ATTATCAAGA ATATAAAGCC GAGTTTATCA AGCTATTTGG CTTTGGCATC
GAAGGCATAG ACTACGATGC CGATGTGAAC CCATACGTTG AGTTCGATGT GATCGAGCTC
TAA
 
Protein sequence
MIIKPKIRGF ICTTTHPVGC EANVQEQIAL TKAKGKIANG PKKVLVVGSS SGYGLSSRIA 
AAFGSDAATI GVFFEKPGTE SKPGTAGWYN SAAFDKFAKA EGLYSKSINC DAFSHEAKQK
VIELIKQDLG QVDMVVYSLA SPVRKLPDSG ELVRSALKPI GEVYTATAVD TNKDCIIEAT
VEPATEQEIA DTVTVMGGQD WELWINALAE AGVLSDNCKT VAYSYIGTEL TWPIYWHGAL
GQAKMDLDRA AKALNDKLAT KGGSANVAVL KSVVTQASSA IPVMPLYIAM VFKKMRQEGL
HEGCMEQIYR MFSERLFRAD GAKPETDSNN RLRLDDWELR EDIQQHCRDL WPQVTTENLS
ELTDYQEYKA EFIKLFGFGI EGIDYDADVN PYVEFDVIEL