| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2487 |
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| Symbol | |
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| ID | 4253058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2955321 |
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| End bp | 2956328 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119119 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_734615 |
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| Protein GI | 113970822 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0101156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAC TCGACGTTAG AAACCTGACC ATTGAGCTCG ACACGCCCCA CGGCAGAGTC
CGCGCCCTTG AGAAAGTGAG TTTGACCCTG AACGCGGGGG AAATCCACGG TCTCGTGGGT
GAATCAGGCT CAGGCCGCAG TCTGCTCGCT AGAGCCATTC TTGGGATCCC AGGCCCCAAT
TGGACCATTA CCGCCGACCG CATGATGTGG GATGGTAATA ATCTGATGGC CATGACCTCG
AAGGAGCGCC GTAATCTGAT GGGTTCAGAT ATGGCGATGA TCTTCCAAGA TCCGTCTGGT
AGCCTTGACC CTTCGCAAAC CGTGGGTAGT CAGCTGATGC AGGCCATGCC TAAGAATCCT
AAGGCTTACT TTTGGCAAAA GCACAAACAT GCCAAACAGA CAGCGCAAAA ATGGCTGCAT
AAGGTCGGGA TTAAGAATCC GCAAAAGGTC ATGTCCAGCT ATGCTTGGGA GCTTTCGGAA
GGCGAATGCC AAAAAGTGAT GATCGCGATG GCAATTGCCA ACCAACCGCG ATTATTGATC
GCCGACGAAC CGACAAACTC GATGGAGCTG AGCACTCAGG CACAGATTTT CCGCCTACTA
TCACAGCTTA ACCAGCTACA AAACGTGTCG ATTTTAATCA TCAGCCACGA GCTTGAAACG
CTAGCACAAT GGTGCGATCA CCTATCCGTG CTCTATTGCG GCCAAGTGAT GGAGTCAGGC
CCAACGGAAG AACTGATCAA TCAGCCCTAT CATCCTTACA CTAAGGCACT CTTGGATAAT
ATGCCGGATT ACTCGGGGAT AGAGGCGCAC AAGGCCATTA TGCCGACCCT ACCAGGCTCG
GCCCCCGCCC TGCAGCATCT GCCCATTGGT TGTCGCCTAG GGCCAAGATG CCCTGAGGCA
CAAAAGAAAT GCGTTAATCA GCCAAGTTTG AGTCATTTAC GCGACCGCTA CTTTGCCTGC
CATTTCCCTT ACCACGGTGA AACGACAAAT GACGACCCCA CTGCTTAA
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| Protein sequence | MPLLDVRNLT IELDTPHGRV RALEKVSLTL NAGEIHGLVG ESGSGRSLLA RAILGIPGPN
WTITADRMMW DGNNLMAMTS KERRNLMGSD MAMIFQDPSG SLDPSQTVGS QLMQAMPKNP
KAYFWQKHKH AKQTAQKWLH KVGIKNPQKV MSSYAWELSE GECQKVMIAM AIANQPRLLI
ADEPTNSMEL STQAQIFRLL SQLNQLQNVS ILIISHELET LAQWCDHLSV LYCGQVMESG
PTEELINQPY HPYTKALLDN MPDYSGIEAH KAIMPTLPGS APALQHLPIG CRLGPRCPEA
QKKCVNQPSL SHLRDRYFAC HFPYHGETTN DDPTA
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