| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2486 |
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| Symbol | |
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| ID | 4253057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2954427 |
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| End bp | 2955317 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119118 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_734614 |
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| Protein GI | 113970821 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00863619 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCCAA TTAAAATTTA TCAGGAAGAT CAAATTGCCT CGCCGATGAT GCGGGTCTGG
CAGAATTTTT CGGCAAACCC CTTTGCCTTA GCGGGTCTGT GGACCATTGC TTTTCTGCTG
CTGCTCACCC TGTTCGGACC AATGATTGCC CCCTTCTCCC CTGAGGCGCA GGATCCACGG
GCATTACTGT TACCGCCCTC TTGGGACCCT TCGGGCACAG TGGCGCACTT TTTGGGGACC
GACGATCTGG GTCGTGACAT TTTTAGCCGC TTGCTGCATG GGGCACATTT AACCTTCGGC
ATGGCGCTGA TGATTGTCGG TACTGCATTG TTTATGGGGT TCATCATCGG CTCGCTCTCC
GGCATGATGC GTGGCTTAAA ATCCAGTATT TTGGGGCACT TGCTCGATGC ATTACTGTCT
ATCCCTTCAC TATTAATGGC GATTTTAGTG GTTGCCGTCA TGGGGCCAGG GCTTGAAAAC
GTCTTCTGGG CCGTGGGCAT TGCCTTAACG CCACAGTTTG TACGCTCCAT TCATCAATCG
GTACATGAAG AGTTACAGAA AGAATATGTG ACTGCGGCCC GTTTAGACGG TGCCAATTCG
CTGCAGATTT TTTGGTATGT GATCATGCCA AACGTCTGGG AAGTGGTGAT TATTCAAACC
ACGTTAGCTA TTTCTGCCGC GATTTTAGAT ATTGCCGCCC TTGGCTTTTT AAGCCTTGGC
GCCCAAGCTC CTAGTCCTGA ATGGGGTGCA ATGGTTGCCC AAGGTATGGA TAATTTGTTG
ACCGCACCTT GGACTGTGAC CATTCCAGGG CTGGCGATTC TTTTTAGTGT GCTCGCCATT
AACTTGGTGG GCGATGGCTT GAGATCGGCG CTTGCGCCCA TCAGAAACTA A
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| Protein sequence | MPPIKIYQED QIASPMMRVW QNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFSPEAQDPR
ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALMIVGTAL FMGFIIGSLS
GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS
VHEELQKEYV TAARLDGANS LQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG
AQAPSPEWGA MVAQGMDNLL TAPWTVTIPG LAILFSVLAI NLVGDGLRSA LAPIRN
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