| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2485 |
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| Symbol | |
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| ID | 4253056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2953409 |
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| End bp | 2954440 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119117 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_734613 |
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| Protein GI | 113970820 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00934567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGAT ACCTGTTACG GCGCCTCAAT CTGTTTCTTG CCACTTCGCT AGTGATGGTC
GGCGTGTTGT TTTATGCAAC TGGCTTGTTT CCGGTTGAAC GCACCTTCGC CCTCACAGGG
ATCCATGCAC CATCAGAGAG CCAACTGGTG CAAATTGAGC AGGACTATAA GTTAGATAGC
AATAAAGCCA TGCAGTTCAT TGCTTATTTA CAGCAAAGAC TGAGCGGCAA TTTGGGCGTC
TCCGTCACCT CGCACCAAAG CGTGGCCGAA GAGTTAAGCT CTGTGCTACC GGCCTCCTTC
GAACTAGCGG TGATGGCGGC CGTGATAGCC ATTGGTTTAG GTGTGCCGCT TGGCGTGTTG
GCCTCCCAGA GTCAACATAA ACTCACCCAA AATACCATTA TGGCGATTAC CCTGACGGGC
TATTCTGTTC CTGTATTCTG GTTAGGTTTG TATTTGTCAC TCTGGTTTGG TGTCGACTTA
GGCTGGCTGC CCATTTCAGG GCAACTCAAT CTTTTATATG AGATAAAACC CGTTACAGGA
TTTATGTTGG TCGACATTTT ACTGTCTGAT TCGGAATATC GCATATCTGC CTTTAAAGAT
GCCTTATTGC ATATCGTTCT GCCCGCCACC ACACTTGCAG TGCTACCTTT TACCGTGGTC
GTACGCAGCA CTCGCTCGGC AATGATGAAT GTGATGAACC AAACCTTTAT CCGCGCCGCC
GAAGCCAGAG GCATGCACAC CAATACCATT ATTTTGCGCC ACGCCTTACC CAACGCGCTG
ATCCCAGTAT TAAAGCACTT AGGGTTAATG CTCGGAGCAT TTGCGAGCTA TGCGATTGTT
GTTGAAATGA TTTTCTCTTG GCCGGGTGTG GGTTCTTGGT TGGTGTCGGG TATTTATCAG
CGGGATTATA CGGTTATCCA GGGCGGGATT TTAGCCGTAG CCTTGTTGAT CATCTTTTTA
AGTATTTTGA TTGAAGTGCT GCATACCGTC TTCAATCCCT TGAGCAGAAA AGATCTTTAT
GCCTCCAATT AA
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| Protein sequence | MFRYLLRRLN LFLATSLVMV GVLFYATGLF PVERTFALTG IHAPSESQLV QIEQDYKLDS
NKAMQFIAYL QQRLSGNLGV SVTSHQSVAE ELSSVLPASF ELAVMAAVIA IGLGVPLGVL
ASQSQHKLTQ NTIMAITLTG YSVPVFWLGL YLSLWFGVDL GWLPISGQLN LLYEIKPVTG
FMLVDILLSD SEYRISAFKD ALLHIVLPAT TLAVLPFTVV VRSTRSAMMN VMNQTFIRAA
EARGMHTNTI ILRHALPNAL IPVLKHLGLM LGAFASYAIV VEMIFSWPGV GSWLVSGIYQ
RDYTVIQGGI LAVALLIIFL SILIEVLHTV FNPLSRKDLY ASN
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