| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2482 |
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| Symbol | |
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| ID | 4253053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2949765 |
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| End bp | 2950448 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638119114 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_734610 |
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| Protein GI | 113970817 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0189828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAATTT TCTCTCGTTT CGCCGATATC ATTAACTCTA ATATCAGCGC ATTACTCGAT
AAAGCAGAAG ACCCTGAAAA AATGGTTCGT CTGATCATCC AAGAGATGGA AGATACACTG
GTAGAAGTTC GTTCTACTTC AGCAAAAGTA TTAGCTGAAA AGAAAGAATT AATCCGTCGT
ATCAACCGTG TTGAAGAACA AGTTCAGGAT TGGCAAGACA AAGCTGAACT GGCCCTTTCA
AAGGACCGCG AAGATTTAGC CAAAGCGGCT TTAGTTGAAA AACAAAAAGC AGCAGGTTTG
GTGGATACCT TAAACCAAGA GTTGGCGGTG CTGGATGAGC ATATCGCACG TTTAAAAGAC
GAAGTGGGTT TGCTGCAGGA AAAACTGTTA GACGCAAAAG CGCGCCAAAA AACCATTATT
TTGCGCACTC AAACCGCCTC ATCACGTTTA GAAGTGAAGA AGCAGTTAGA CTCAAGCAAA
ATCGACAACG CTATGCTCAA GTTTGAACAA TATGAGCGCC GTGTCGAAGG GCTAGAAGCG
CAGGTTGAAT CTTACGATCT GGGTAATAAA AAGACCTTAG CCGATGAGTT TGCCGCGCTG
GAAGCCGAAG ATTCAGTGAA TGCCGAACTG GAAGCATTGA AGGCTAAAGT GAAAGGCAAA
GCTACAACTA AGTCAAAAGA ATAA
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| Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELIRR
INRVEEQVQD WQDKAELALS KDREDLAKAA LVEKQKAAGL VDTLNQELAV LDEHIARLKD
EVGLLQEKLL DAKARQKTII LRTQTASSRL EVKKQLDSSK IDNAMLKFEQ YERRVEGLEA
QVESYDLGNK KTLADEFAAL EAEDSVNAEL EALKAKVKGK ATTKSKE
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