| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2480 |
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| Symbol | |
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| ID | 4253051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2949134 |
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| End bp | 2949520 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119112 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_734608 |
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| Protein GI | 113970815 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02976] phage shock protein B
[TIGR02978] phage shock protein C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00406786 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGAGGAA CTAGTGGCCG TACTTTGTAT CGCATTCCCC AGTCAGGTAA AGTCGCAGGT
GTGTGTGCGG GGATAGCCGA ATACTTTGCA ATTGAAACAT GGTTAGTGCG GGTACTTGCG
GTTTCTATCT TCCTATTAGG TGGTTCGGGC GTCGTGTTTA TCATCTATGT TGCGTTATGG
GTGATACTCG ACATCAAACC CCAAAATAGC ACTGTTAGGG ATGACATCGA GGTGAAGAAG
AAACCTTGGC AATCGGGAGA GCCTGCTAAA CAAGCGCTGA GCGATGTGAG CAGGCAATTT
AGAAGCCTAG AGGTGAGACT GCAAAACCTT GAACGCCATG TTACATCTGA TAACTTTGAT
TTAAAAAGAC AAATCAATAG CTTGTAA
|
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| Protein sequence | MRGTSGRTLY RIPQSGKVAG VCAGIAEYFA IETWLVRVLA VSIFLLGGSG VVFIIYVALW
VILDIKPQNS TVRDDIEVKK KPWQSGEPAK QALSDVSRQF RSLEVRLQNL ERHVTSDNFD
LKRQINSL
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