| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2478 |
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| Symbol | |
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| ID | 4253049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2946380 |
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| End bp | 2947582 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119110 |
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| Product | hypothetical protein |
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| Protein accession | YP_734606 |
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| Protein GI | 113970813 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3768] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01620] conserved hypothetical protein, TIGR01620 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00454827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTAG ATTCGTTACC ACCTTCAAGT GAGTCAGAGA CAAACGGGCT CGATAAGCCA
ATGTCTGAAA ATACACTTGG AAGCCAACCG CTCAAAAAAC AACAAGTATT TGATTCTGAT
AAGGTCAAAC TTCAGTCTGC TTCTGATGAG CTTAAGAGTG CCCAAGCTTT TGCACCACTG
ACACCCTTAA AAGCGGCGGA TGAAGTTGTC GATGATGCCT TAGCGGCTCA TCCGCAAGCA
TTGGATGTAT CATCCATTCG GCCAAAACTG CATCAATCTC GCCGTTGGTC TTGGCTGGCG
CGTTTATCCG TCTTTGGGTT ATTGCTACTG GTTTTAGTGC AAACGGGATT AGGTTTGCGA
GACGCTTGGT TATCAAGCCC TTGGTTATTT AGCTTTTATG GCGCAGTACT CAGTTTAGTC
GGCAGCTGGG CTATGGTCGG AGCCTTGGGC GAATACCGTA AATTAAAACG CCTCAAGCAG
GTTGCCGATA CGCAAGAGTC GGGTGCAAGG CTTGCCCTCA GTATGCAAAT GGGCGAGGCC
GATGGTTTTA TCAATAATAT AGTGCGCCAT TATCCCGATA GTCAGGGGCT ACAGCGACTG
CGTCAGTCGC TCAAAGATGA ACATAACGAT GCTGAAAAAG TGCTGTTATT TGAGGATTTA
GTGCTTACTG AGCGGGATGA ACTGGCGAAA AAAATCGTCC GTCGATACGC GGCCGAGTCA
GCCGTGTTGC TTGCCGCGAG TCCGCTAGCT GCATTGGATA TGGCCATTAT TCTTTGGCGT
AACCAACGCA TGCTGCGTGA TGTCGCCGCC TGTTATGGGA TAGAATTAGG CTATTGGAGC
CGGATAAAAC TCATTCGTAG CATCATTATT AACATCATCT ATGCCGGTAC CAGCGAGTTA
GTGACCGATT TGGGGACCCA ACTGCTGTCG GTTGAGATGA CGGGGAAATT ATCCGCACGG
CTTGCTCAAG GTTTAGGTGG GGGGCTGCTC ACAGCGCGCT TAGGGTATCA AGCCATGGCG
CTATGTAGAC CTATTCAGTT TAGGGAGGAG CAGCGCCCCA AATTATCGAA AGTTCATCAA
GAGTTGTTGA TTGAGCTTAA ACAGTTTGCC GGTAAGTTAT TGACTAAAGA CGGACGAGAT
GCACTTAAGA GCCAATTAGA GGCTGCTGAA CTTAAAACAG GCTCAACACC CAAAGAGAAA
TAA
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| Protein sequence | MSLDSLPPSS ESETNGLDKP MSENTLGSQP LKKQQVFDSD KVKLQSASDE LKSAQAFAPL
TPLKAADEVV DDALAAHPQA LDVSSIRPKL HQSRRWSWLA RLSVFGLLLL VLVQTGLGLR
DAWLSSPWLF SFYGAVLSLV GSWAMVGALG EYRKLKRLKQ VADTQESGAR LALSMQMGEA
DGFINNIVRH YPDSQGLQRL RQSLKDEHND AEKVLLFEDL VLTERDELAK KIVRRYAAES
AVLLAASPLA ALDMAIILWR NQRMLRDVAA CYGIELGYWS RIKLIRSIII NIIYAGTSEL
VTDLGTQLLS VEMTGKLSAR LAQGLGGGLL TARLGYQAMA LCRPIQFREE QRPKLSKVHQ
ELLIELKQFA GKLLTKDGRD ALKSQLEAAE LKTGSTPKEK
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