Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2471 |
Symbol | |
ID | 4253042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2940434 |
End bp | 2941207 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119103 |
Product | hypothetical protein |
Protein accession | YP_734599 |
Protein GI | 113970806 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00175338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGAGTTGT TACTCGAGCC CAGTAACTGG GCCCTGTTGG CTGTCATTGG CTTAATTGCA GGTTTTATCG ATGCCGTAGT CGGTGGTGGA GGCCTGCTCT CCATTCCTGC CCTGCTCACC CTCGGGATCC CGCCCCACAC CGCCTTAGGT ACCAATAAAT TTGCCGCCAG TTTTGGCTCC TCCATGGCGG CTTGGACCTA TTATCGCCAA CATCTGCTCA AACCCAGTTT TTGGTATATG GCGTTTATCG CCACCTTTAT TGGTGCAGTA CTCGGCAGTG TGTTGGTGTA CTTGTTAAAT GCACAGTGGC TTGAAAAAGC CTTACCACTG CTCATTATTG GCATCGCGAT TTACAGCCTG CTGAGCCCAA ATGCCATCTC GGATACCGAT TGTCAGGCAC CAACAAAAGC TCAATCTAAA CTCAAACAAA GTCTGCAAGG GCTCCTGCTG GGTGGTTATG ATGGTTTTGC CGGCCCTGGC ATTGGCGCCT TTTGGACTGT AAGTTCAGGC GCTTTATACA AACTACCGCT GTTGCATAGC TGCGCGCTTG CCAGAGCCAT GACCTTTACC AGTAACTTAA CGGCGCTGGC GATCTTTGGC TTTCTAGGGC AAGTCCATTG GCAAATCGGT TTGTGGATGG GGTTATCTAT GATGCTCGGC TCCTTTATCG GCGCCCGCTG CGCGATAAAA TTTGGTATGC CTTTTATTCG GCCTTTGTTT ATATTAATTG TCCTGTCAAT TGCCGCTAAT CTGGCATGGA GCGCATGGTT TTGA
|
Protein sequence | MELLLEPSNW ALLAVIGLIA GFIDAVVGGG GLLSIPALLT LGIPPHTALG TNKFAASFGS SMAAWTYYRQ HLLKPSFWYM AFIATFIGAV LGSVLVYLLN AQWLEKALPL LIIGIAIYSL LSPNAISDTD CQAPTKAQSK LKQSLQGLLL GGYDGFAGPG IGAFWTVSSG ALYKLPLLHS CALARAMTFT SNLTALAIFG FLGQVHWQIG LWMGLSMMLG SFIGARCAIK FGMPFIRPLF ILIVLSIAAN LAWSAWF
|
| |