Gene Shewmr4_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2471 
Symbol 
ID4253042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2940434 
End bp2941207 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID638119103 
Producthypothetical protein 
Protein accessionYP_734599 
Protein GI113970806 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00175338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAGTTGT TACTCGAGCC CAGTAACTGG GCCCTGTTGG CTGTCATTGG CTTAATTGCA 
GGTTTTATCG ATGCCGTAGT CGGTGGTGGA GGCCTGCTCT CCATTCCTGC CCTGCTCACC
CTCGGGATCC CGCCCCACAC CGCCTTAGGT ACCAATAAAT TTGCCGCCAG TTTTGGCTCC
TCCATGGCGG CTTGGACCTA TTATCGCCAA CATCTGCTCA AACCCAGTTT TTGGTATATG
GCGTTTATCG CCACCTTTAT TGGTGCAGTA CTCGGCAGTG TGTTGGTGTA CTTGTTAAAT
GCACAGTGGC TTGAAAAAGC CTTACCACTG CTCATTATTG GCATCGCGAT TTACAGCCTG
CTGAGCCCAA ATGCCATCTC GGATACCGAT TGTCAGGCAC CAACAAAAGC TCAATCTAAA
CTCAAACAAA GTCTGCAAGG GCTCCTGCTG GGTGGTTATG ATGGTTTTGC CGGCCCTGGC
ATTGGCGCCT TTTGGACTGT AAGTTCAGGC GCTTTATACA AACTACCGCT GTTGCATAGC
TGCGCGCTTG CCAGAGCCAT GACCTTTACC AGTAACTTAA CGGCGCTGGC GATCTTTGGC
TTTCTAGGGC AAGTCCATTG GCAAATCGGT TTGTGGATGG GGTTATCTAT GATGCTCGGC
TCCTTTATCG GCGCCCGCTG CGCGATAAAA TTTGGTATGC CTTTTATTCG GCCTTTGTTT
ATATTAATTG TCCTGTCAAT TGCCGCTAAT CTGGCATGGA GCGCATGGTT TTGA
 
Protein sequence
MELLLEPSNW ALLAVIGLIA GFIDAVVGGG GLLSIPALLT LGIPPHTALG TNKFAASFGS 
SMAAWTYYRQ HLLKPSFWYM AFIATFIGAV LGSVLVYLLN AQWLEKALPL LIIGIAIYSL
LSPNAISDTD CQAPTKAQSK LKQSLQGLLL GGYDGFAGPG IGAFWTVSSG ALYKLPLLHS
CALARAMTFT SNLTALAIFG FLGQVHWQIG LWMGLSMMLG SFIGARCAIK FGMPFIRPLF
ILIVLSIAAN LAWSAWF