| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2467 |
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| Symbol | |
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| ID | 4253038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2931349 |
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| End bp | 2934072 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638119099 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_734595 |
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| Protein GI | 113970802 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000162909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00002571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAAGA GTAATTTACT TGCGAAATCA GTGCGTTTAG CGTTGATTAG CGGTGTGGCA
GTGACAACAT TAAATGCACC AGCAGTATTT GCAGCTGATG AAGATGGTGC GAAGGTTGAA
CGAATTGAAG TAACAGGTTC TCGCATCAAA CGTACAGACT TAGAAACTGC TAGCCCTATT
TCTGTGTTTT CTTCGGAGGA TATTGCTGCT TCTGGGGCAG TAACTTTAGA AGATTTTGTG
CAGAATATTC CTGCAATCAA CGGTGGTGCC GAAGGCTCCT CGGTTAACAA TGGTAGCCGT
GGCTATGCGA CTGCATCATT GCGTGGGTTA GGTTCAGGTC GTACGTTAGT TTTAATTAAC
GGTCGTCGAT TTGCATCTGG AGACTTAAAC TCCATTCCTA CTGCATATGT TGAGCGTATT
GAGGTTTTAC GTGATGGTGC TTCGACGGTA TATGGTTCTG ATGCGATTGC TGGTGTAATT
AACTTTATTA CCAAAAAGAA CTTCGAAGGT GCCGAATTTA ATGTTCAGTA TGACATTACT
GGTGAAGGTG ATGGTGATAA AACATTATTT TCTCTAACAA CTGGAACATC GTCTGAACGT
GGTAACGTAG TTTTATCTCT GCAATATACA GATCGTAAGG CTATTGGGCA GGGAGACCGT
GATTTTTCTT CATGTCCAAT CTCTGAAAAT GCTAACGGTA AATATTGTGG TGGTTCTGGC
ACTATTCCGC AAGGGCAGTT TTTTTACGCG GATGGAACTC CAACCTCAGA TGGCTATGTA
AAAGATAAAA CAACAGGACA AGTTCGTTTA TTTGATCCTA CAAAAGATGC ATATAACTTC
TCTCCAGCTA GTTACATGGT AACACCACAA GAAGTATTTA GTATTAATGG TGCGGGAAGA
TATGAAATAA CAGATACACT GTCTACTTTT ATTGAAGGTG GTTTCACTAA CCGTCAATCT
GATCAATTAA TGGCTCCTGA AGGAACTTTC TGGGGACCAT TAATGCCTGC GTCTAATCCT
TACAACGTCA CAGGTGAAGA TATTTACGTA GTACGCCGTT TATCTGAAAC TGGTGGCCGA
GGATTTTCTC AAGACTTTTC TGATTATAGA ATGGTGTTTG GCTTTGAGGG CTCTCTTGGT
AATTATGACT GGGATTTAGC ATATAACTTT GCTCGTTATG TTGATACTCG CTTAGATACC
GGTCGAGTTA ACCCAACTCG TGTGGATACA ATGCTAGATC CTGATTTATG TGCGGCTGAC
TCTGATTGTC CTGGAGTATG GAATATATTA GAAGAAAATA CGCTTACTGA CGCAATGTTA
GCATACATGT TAGTACCTAA CTCACCTGTC GTGCGTGGTG AAACACGTCA ATTACAAGGT
AACATCTCTG GTGGCGTGGG AATTGAATTA CCTGGTGGTG AAATTATGTT TGCTGCGGGT
TTTGAAAAAC GTTGGGAAGA GTACTCGAAT ACACCTGATG GTGCTGCATC AATTGGTCAA
ATATATTCTG TTGCAGGTGA GCCAACCTCC GGTAAATATT CTGTGAATGA GCTTTATACA
GAGTTAGACC TTCCTATTTT AGAAGGCGTC GCTTTTGCTG AATCATTACG TGCAACGGCA
GCTGTTCGTT ATTCTGATTT TGACTTCTTG GACGATAGTT CAACGAATAC TAAATTTGGA
TTGGAATGGG TTCCTGTTGA TGGTTTAATG CTACGTACTA CGATAGCGTC AGGCTTCAGG
GCTCCCGGTA TTGGTGAATT ATTTTCTCCT CAAAGTGAAA CAAACTTAGC ATATACTGAA
CCTTGTAAAC AGTATGCCAC AGGTTCGCAA TCTGCCATCG TTAAGGCAAA CTGTGCCGCG
GAAGGATTAC CTGGTAACTT TACGCTATCA TCCGACCAGT CTAGTACAGT TGTAGGCGGG
AACCCTGATC TAAAACCAGA AGAATCTGAT AGTTTTACTG CTGGCTTTGT ATATAGCCAT
GATGTTGGTA TTACTATGAG CGTTGATTAT TTCAATATTG AAATTACAAA CGGCATTGGA
ACTGCTGGTA CTGATAACGT CATCAATGGT TGTTGGAGTT CTGAAAACTT CTCTAGTCCA
TTGTGCCAAT TTGTTAAGGG GCCAAGTTTA ACTGGCGATG CTCCACATGC AACCTCACCA
TACCGCTCTG CACTTGGTAC TGTTGCAGGG GTATTATTGA CAAATGCTAA CTTATCAACA
TTTGAAACTG CTGGCTATGA TTTCGATTTT ACTTATAAAA CTGATTTAAT GAGTGGTAGT
TTTTCAGCAA CCTTAAATGG AACATACCTT GAGAAGTATG ATTACACACC ATTTGATGGT
GCTGATAAAG TCGAAGCTGC AGGAAAAGTT GCAGCGGATC AATGGGAAAC AACTCTTGCA
GTTTTCTCTA AGTTACGCAC AAACTTAAAT TTAACTTATA CAATGGATAA TTGGTCAGTG
GGTTGGCAAA CTCGTTACCA ATCTGAAGGT GAAGATTTAT ACGCAAGTGC TAGTAATTTA
GATAATATTG CTGATGCTGT ATGGTATCAC GATGTTCAAG GTACTTATTA TGTCTTTGAA
AATACAGCTT TGACGGTGGG TGTTCGTAAT TTATTTGACC AAGAAGCACC ATATATTACT
AATAACCAAG ACATGAATAC TATCCCTGTT TCTTACGACA CTGCAGGCCA GTATTGGTAT
GCTAAAGTGA ACGTTAAGTT CTAA
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| Protein sequence | MHKSNLLAKS VRLALISGVA VTTLNAPAVF AADEDGAKVE RIEVTGSRIK RTDLETASPI
SVFSSEDIAA SGAVTLEDFV QNIPAINGGA EGSSVNNGSR GYATASLRGL GSGRTLVLIN
GRRFASGDLN SIPTAYVERI EVLRDGASTV YGSDAIAGVI NFITKKNFEG AEFNVQYDIT
GEGDGDKTLF SLTTGTSSER GNVVLSLQYT DRKAIGQGDR DFSSCPISEN ANGKYCGGSG
TIPQGQFFYA DGTPTSDGYV KDKTTGQVRL FDPTKDAYNF SPASYMVTPQ EVFSINGAGR
YEITDTLSTF IEGGFTNRQS DQLMAPEGTF WGPLMPASNP YNVTGEDIYV VRRLSETGGR
GFSQDFSDYR MVFGFEGSLG NYDWDLAYNF ARYVDTRLDT GRVNPTRVDT MLDPDLCAAD
SDCPGVWNIL EENTLTDAML AYMLVPNSPV VRGETRQLQG NISGGVGIEL PGGEIMFAAG
FEKRWEEYSN TPDGAASIGQ IYSVAGEPTS GKYSVNELYT ELDLPILEGV AFAESLRATA
AVRYSDFDFL DDSSTNTKFG LEWVPVDGLM LRTTIASGFR APGIGELFSP QSETNLAYTE
PCKQYATGSQ SAIVKANCAA EGLPGNFTLS SDQSSTVVGG NPDLKPEESD SFTAGFVYSH
DVGITMSVDY FNIEITNGIG TAGTDNVING CWSSENFSSP LCQFVKGPSL TGDAPHATSP
YRSALGTVAG VLLTNANLST FETAGYDFDF TYKTDLMSGS FSATLNGTYL EKYDYTPFDG
ADKVEAAGKV AADQWETTLA VFSKLRTNLN LTYTMDNWSV GWQTRYQSEG EDLYASASNL
DNIADAVWYH DVQGTYYVFE NTALTVGVRN LFDQEAPYIT NNQDMNTIPV SYDTAGQYWY
AKVNVKF
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