| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2460 |
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| Symbol | |
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| ID | 4253031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2923848 |
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| End bp | 2924471 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119092 |
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| Product | TonB family protein |
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| Protein accession | YP_734588 |
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| Protein GI | 113970795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.43169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000910497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAGAG CACTAGTATC AATCATTATT GGTGCTGCTG TGACTTTTGG TCTGTTCGCT
TTTATGGCGT TCTTGGTCGG TGGTGGGGCG CAACGCGCTG AAACATCGGC CGAGACCCCT
GTAATTGAAA TCACCATGGA TAGACAGGAT TCAAAAGCAC AGAATAAGCC AAGGGTAGTG
CCTAAGCCGC CACCACCACC AGAGCAACCA CAGAAGCCTG ATACTACGCC ACCAGACACT
TCATCAAATA TTGATACGTC TATGTCGTTC AATATGGGTG GTGTTGAAGC TGGTGGTCAC
GGTACTGGTG GCTTCAAATT GGGTAACATG ATGACTCGCG ATGGTGATGC AACACCTATC
GTTCGTATCG AGCCACAATA CCCAATTGCA GCAGCACGTG ATGGTAAGGA AGGTTGGGTG
CAATTGCGCT TTACGATTAA CGAGTTAGGT GGTGTTGATG ATGTTGAAAT TATCAACGCT
GAACCGAAGC GTTTATTCGA TAAAGAAGCA ATCCGCGCAC TGAAGAAGTG GAAGTACAAG
CCAAAGATTG TTGATGGCAA GCCACTTAAG CAACCAGGCA TGACAGTACA ACTCGACTTC
ACTTTAGATA AAGGAGGCAA ATAA
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| Protein sequence | MLRALVSIII GAAVTFGLFA FMAFLVGGGA QRAETSAETP VIEITMDRQD SKAQNKPRVV
PKPPPPPEQP QKPDTTPPDT SSNIDTSMSF NMGGVEAGGH GTGGFKLGNM MTRDGDATPI
VRIEPQYPIA AARDGKEGWV QLRFTINELG GVDDVEIINA EPKRLFDKEA IRALKKWKYK
PKIVDGKPLK QPGMTVQLDF TLDKGGK
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