Gene Shewmr4_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2451 
Symbol 
ID4253022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2916474 
End bp2917283 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID638119083 
Producthypothetical protein 
Protein accessionYP_734579 
Protein GI113970786 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000200533 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGAAGCC TTAGCTCCTA TTACTCAATA ATAACAATCA TGGAATTTGA ACTGACTCTA 
CAAATTGCGG CATTACTCTT TGGCGTGGCT ATGGTGGCGG GGTTTATCGA CTCTATCGCT
GGCGGCGGGG GATTGCTGAC TATCCCTGCG TTAATGTGGG CGGGTTTACC GCCAGCGGTG
GCGCTCGGGA CTAACAAATT ACAGGCCTGC GGTGGCAGCT TTTTTGCGAG TTTGTACTTT
GTGCGTAAGG GATTAGTTGA TTTGAAGGCC GTTAAACTGT CCCTTATCTG TGCCTTTGCG
GGCGCCGCCT TAGGCACTAT ACTGGTGCAG TTGGTCGATG CCAAAGTACT GGAGTTAGTC
TTACCTTTTT TAATCCTCGC GATTGGTTGT TATTTCTTGT TTTCGAAAAA GATTTCGGAA
GATGACCGCC ACCAAGTATT AACGCCTACC GCCTTTGCCT TTACCGCCGC GCTCGGTGTG
GGTTTGTACG ATGGCTTTTT TGGCCCTGGC ACAGGGAGTT TCTTCGCGCT GGCCTTTGTG
ACCTTGGCCG GTTTTGGTCT GGCAAAAGCG ACGGCACACG CCAAGGTGTT AAACTTCTCG
ACCAATATTG CTTCGCTTAT CTTCTTTACC TTAGGTGGCA AAGTGATTTG GGTGCTCGGC
TTAGTGATGC TTGCTGGGCA GGCAATCGGT GCGACCTTAG GTTCGCGCTT AGTCGTGACC
AAAGGCACTA AGATCATTAA GCCATTAGTG GTGACTATGT CCTTGGCCAT GAGTGTGAAG
CTGTTAGCCA GCCAATATCA CCTGTTTTGA
 
Protein sequence
MRSLSSYYSI ITIMEFELTL QIAALLFGVA MVAGFIDSIA GGGGLLTIPA LMWAGLPPAV 
ALGTNKLQAC GGSFFASLYF VRKGLVDLKA VKLSLICAFA GAALGTILVQ LVDAKVLELV
LPFLILAIGC YFLFSKKISE DDRHQVLTPT AFAFTAALGV GLYDGFFGPG TGSFFALAFV
TLAGFGLAKA TAHAKVLNFS TNIASLIFFT LGGKVIWVLG LVMLAGQAIG ATLGSRLVVT
KGTKIIKPLV VTMSLAMSVK LLASQYHLF