| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2449 |
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| Symbol | |
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| ID | 4253020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2911937 |
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| End bp | 2914993 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119081 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_734577 |
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| Protein GI | 113970784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00634989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000799023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCCAC TCTCGCTGTC GATGTCGGCC TTTGGTCCTT TTGCTTCGAC TCAAACCATT
GATTTTACCG AACTGGGGAA TAACCCCTTA TTCCTGATCA ACGGGCCAAC AGGCGCGGGC
AAAACCACGC TGCTCGACGG AATTTGTTTT GCGCTCTATG GAAAAACCAC GGGTAACGAG
CGTGAAGGCA GCCAGATGCG CTGCGATATG GCCGATGATA GCGTACTGAC TGAGGTGACC
TTTCATTTTC AATTAGGTAG TACGGGTTAT CGTATTCGCC GCGTCCCCGA GCAGGAAAGA
TTAAAGAAAA GCGGTGATGG CTCAACGGTA CAAAAGAGTG AGGCGCAGCT GTATAAGATT
GCCCCGGATG GCAGTGAAAC CCTTATCGTC GCCAGTAAAG TGTCAGACGC CACGGCCGAA
ATTGAGGCAT TAACCGGCCT AGATGTGGAG CAGTTCCGCC AAGTGATGGT GCTTCCGCAG
GGGAAATTTC GCGAATTGCT GATGGCCGAC TCTAAGGCGC GTGAGCAGAT TTTTAGCCAA
TTATTCCAAA CCCATATCTA TAAGCGCATC GAAGATACTC TAAAGGCTAA GGCGGCGGAT
ATTCGCAATC TTGTCAAAGA GCAGCGCGCC CGCCGTGACG GTATTTTGCA AACGGCAGCA
CTCACATCCG ATGATGAACT TACTGCAGAG TTGAGTCGCA TTGAACCCGA ATTCGCGGCG
GCGACGGCAG CAAAAGAGCA GAGCGTTGCG GCGCATTTGG CGGCATTAAA ACAGCGTGAT
AGCGCGCAGC AACTCTTTGC TGAATTTACT CGCTTACAGG AATTGCAGGC TGAGGCGCTT
AGCCTTAATG AGCAGCAAGC GCAAATTGCA ACCCAAACGA CACGGCTTGA GGTGGCCAAG
CAAGCACTGC GGGTAAAACC CTTATTAGAT AATGCCTTGT CGCGGGAGCA AGAAGCGAGT
GTTGCAGCCG CTCAGCGCGA TAGCGCACAG TTGACGCTCG ATGCCGCTAA GCTCGCACTC
TCTCATGCTG AAACTGCGGC GCAGGAAATT ATCCCCCTTG AACATAAGCT GCGTGAGGTT
GAGCAGCAAA ATAGTCATCT CAGTGCGTTA GTGCCGCAGC TGGCAGAGTT TGCCAGCCTG
GAACAAGCTT TAGCGCAGGC AAAAGAGATA CTGCAACACA CCAAATTGCA GGGGCAGGAG
AGTAAAACTG CACTTGCCAC CTTAGTTGAA CAGCGCGGTC ATTGTGAGAA TCAACTGCCA
GCCTTGCAAT CGCAAAGTGA GCAGCAACTT GCCACTGCGC AGGCGCTGCA GCAGCACCGT
CATATGCTCG AGCAGTTCAA GCAGTGGCAG CAGATCTGTG CCAAAGTTGC GCATACTCAA
GGGGTTCTTG AGCAGGTCGG TTTACAAGGA AAAGCGCTTA ATACCCAATA TCAAGCAGCT
TCAACGGCTT ACAAGTCTTT GCAACTGAAA TGGTTTCAAG GTCAGGCAGC CATTTTAGCT
AGAGAGTTAA AACCCCATGA GCCATGCCCG GTTTGTGGCA GTTCGACCCA TCCTCAGCCC
GCGGTGAGTC ATGAGGATTT ACCAACGGAT CTACAATTGC AGGCGGCGCA GGATGCCGAG
GCCTTGGCGC TCGATAATCT CAATAAAGCG CGGGCAGAAT ATCGTGGGCT GCAAAAGCAA
TTAGAAGCAC AGCAACAGCA GGCGAATGAT CTGGCAACAG CCCTTGGTGA TAAGGTTGAG
TTGTCACTCG AATCCCATAG CCAAACCTTA GAAAGGCTCA TGCAGCAAGC GAAGCAAGCC
GATGATGCGG CGCAAGCGCT GCAGCTGTTA CAGCAACAGA TCAAAACCTT GCAGCAGCAA
GAGTCGACTT TGGCGCAGCA ACTCGAACTT GAGCGTGAGC GTTACCGTGA GCAAGAAGGC
AAAGTCGAGC GGCTATCGGG TCAACTTGCG GAAAAAGCGC TGAGGATCCC AGAAGAATAC
CGAACACTGG ATGTATTGAA TCAAGCGATT GCGAATAACC AGCAACAACT TGAACAGATA
AAACGTCAGA TTGATGTATT GAGAACCGCG CAGCAGCAGG CAACGCAGCA GAGTGTGGCG
GCGCAAACGG CATTATCGGC GGCGATAGAG CGTTGTCATG CTACGGTAGA GCTGCAGGCG
CAAGCACAGC AGACACTTCA GACGGCGCTC GATAACGCGG GCTTTATTGA TAGGGATGCA
TTGCGCGAAG CCTTGTTAAC CGATGAGCAA ATGCAGACGC TGGCCGAGGG TAAAGAAACC
TACCACAGAC AGTGCGCCTT AAATCAGTCG CAACTGACTC AGCTTACAAC CAAGTTGAGC
GAGTCGACAT CACCCGATCT TGACGCCTTA GAGGCCTTGC TCACTGAGCG ACTCGCGCAG
CTTAAAAATG CGGAAGAGCT ATGGAGTCAA CTGAATACTC GGCTCACCCT GCTTAACAAT
ACCCAAACTC AGCTGGCGGT GGTCGATCAA AAGGCCAAAT CCCTCGAGGA TGAATACGCT
GTGATTGGCA CCTTGGCCGA TGTTGCCAAT GGTAATACGG GCAACAAAAT TTCCCTGCAA
CGCTTTGTGC TTAGCGTATT GCTCGACGAT GTGTTGCTTG CGGCAACGCA GAGGCTGCAT
TTAATGAGTA AAGGGCGCTA CCGATTATTG CGCAAAGAGG ACAGGGCGAA GGGCAATAAG
GCCTCAGGGC TAGAGCTTGA AGTCGAGGAT GCCTACACCT CTAAAGTGCG TCCCGTGGCG
ACCTTAAGTG GCGGTGAGAG TTTTATGGCA GCCTTGTCGA TGGCTTTGGG CTTATCGGAT
GTGGTTCAAG CCTACGCAGG GGGGATAAAA CTCGATACCT TATTTATCGA CGAAGGCTTT
GGCAGCCTAG ATCAGGACTC CCTCGAACTT GCCATTCGCA CGCTGATGGA TTTGCAGTCG
GCGGGGAGGA TGATTGGGGT GATTTCCCAT GTATCCGAAA TGAAAGAACA GATAGGCACT
CGAATTGATA TCTTGAAAAC CTCCCATGGG AGTGAAATCA AGGTGATTTT GCCTTAG
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| Protein sequence | MKPLSLSMSA FGPFASTQTI DFTELGNNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE
REGSQMRCDM ADDSVLTEVT FHFQLGSTGY RIRRVPEQER LKKSGDGSTV QKSEAQLYKI
APDGSETLIV ASKVSDATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ
LFQTHIYKRI EDTLKAKAAD IRNLVKEQRA RRDGILQTAA LTSDDELTAE LSRIEPEFAA
ATAAKEQSVA AHLAALKQRD SAQQLFAEFT RLQELQAEAL SLNEQQAQIA TQTTRLEVAK
QALRVKPLLD NALSREQEAS VAAAQRDSAQ LTLDAAKLAL SHAETAAQEI IPLEHKLREV
EQQNSHLSAL VPQLAEFASL EQALAQAKEI LQHTKLQGQE SKTALATLVE QRGHCENQLP
ALQSQSEQQL ATAQALQQHR HMLEQFKQWQ QICAKVAHTQ GVLEQVGLQG KALNTQYQAA
STAYKSLQLK WFQGQAAILA RELKPHEPCP VCGSSTHPQP AVSHEDLPTD LQLQAAQDAE
ALALDNLNKA RAEYRGLQKQ LEAQQQQAND LATALGDKVE LSLESHSQTL ERLMQQAKQA
DDAAQALQLL QQQIKTLQQQ ESTLAQQLEL ERERYREQEG KVERLSGQLA EKALRIPEEY
RTLDVLNQAI ANNQQQLEQI KRQIDVLRTA QQQATQQSVA AQTALSAAIE RCHATVELQA
QAQQTLQTAL DNAGFIDRDA LREALLTDEQ MQTLAEGKET YHRQCALNQS QLTQLTTKLS
ESTSPDLDAL EALLTERLAQ LKNAEELWSQ LNTRLTLLNN TQTQLAVVDQ KAKSLEDEYA
VIGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQIGT RIDILKTSHG SEIKVILP
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