Gene Shewmr4_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2446 
Symbol 
ID4253017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2908925 
End bp2909434 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID638119078 
Producthypothetical protein 
Protein accessionYP_734574 
Protein GI113970781 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.382195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000481223 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACCT TAAAATATTT AAGCGGTTAT AGTCCGGATA TCCAACGCCA AGTTCAGCAA 
CTACTCGAAG GTGGAAAGCT TGCGGATGTT TTGCTGCGTC GTCATCCCAC GGTCCATGAG
ATCCGCAGCG ACAAAGCTCT CTATGACTAT ACCCAAGGGA TAAAAAATCA GTTTTTACGC
CAATCCTCTC CCCTGTCAAA AGTGATCTTC GATGACAAAA TTAGCATGAG TCATCATGCA
CTTGGCTTAC ATTCTTACGT CTCTAGAGTG CAGGGGAATA AAATCAAGGC TAAGAACGAA
ATCCGTATCT CTTCACGTTT AAAGCGCGTC CCCGAACCCT TGCTCAGAAT GGTGGTGGTA
CACGAACTCG CCCATTTAAA AGAGAAGGAT CATAATAAAG CTTTCTATAA GTTGTGTACT
TATATGGAGC CCGATTACCA TCAATTCGAA TTCGATCTGC GTTTATTGCT AACCTGTATC
GACGCTAACC AATCGCCCTA CTCAAACTAA
 
Protein sequence
MQTLKYLSGY SPDIQRQVQQ LLEGGKLADV LLRRHPTVHE IRSDKALYDY TQGIKNQFLR 
QSSPLSKVIF DDKISMSHHA LGLHSYVSRV QGNKIKAKNE IRISSRLKRV PEPLLRMVVV
HELAHLKEKD HNKAFYKLCT YMEPDYHQFE FDLRLLLTCI DANQSPYSN