| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2439 |
|---|
| Symbol | |
|---|
| ID | 4253010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2901409 |
|---|
| End bp | 2901765 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638119071 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734567 |
|---|
| Protein GI | 113970774 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.524862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000641734 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AGCAAGAACT GCAGCAGCTT AACGATAAGT TAGATAAGTT TCGTCGTAAA
CTGGCGGCAG CAGAGCAACG TGGCGATGCC GTTATTGTGG CGCAATTTAA ACGCGATATT
GCGGCGGTCA CTAAGCAAAT CAATAGTGTA AAAACGCAGC AGTCGCGTCT TTTACAAAAG
CAAGGCACAG ATATTCAACA CTTGCCATTC CACCGCGCTC TCACCAAAGC TGAGCAAGCC
GACATGGGTC AACTGAAAAA GTCAGTCAAA GGCCTAGTGG TTGTGCATCC TATGACAGCA
TTAGGACGCG AAATGGGCTT AACCGAAGTA ACAGGTTTTG CGCCAGCTAA GTTTTAA
|
|---|
| Protein sequence | MNLKQELQQL NDKLDKFRRK LAAAEQRGDA VIVAQFKRDI AAVTKQINSV KTQQSRLLQK
QGTDIQHLPF HRALTKAEQA DMGQLKKSVK GLVVVHPMTA LGREMGLTEV TGFAPAKF
|
|---|
| |