| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2438 |
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| Symbol | ribA |
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| ID | 4253009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2900534 |
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| End bp | 2901145 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119070 |
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| Product | GTP cyclohydrolase II |
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| Protein accession | YP_734566 |
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| Protein GI | 113970773 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.353841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000666769 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGATAA AATATGTCGC GACGTCAAAA TTACCCACTC CCTGGGGCGT TTTTGCCATG
CACGGTTTTG AAGATACCGA AACCGGTAAA GAGCATGTTG CCCTCACATT TGGCACCCTA
AGTAGCGATG CCCCCGTATT AGGTCGTATT CACTCTGAAT GTCTTACGGG CGATGCCTTG
TTCAGCTTAC GCTGTGACTG TGGCTTCCAG CTGCAAACCG CGATGCAAAA CATTGCCGAA
ACCGGCAGTG GATTTATCTT ATATTTGCGC CAAGAAGGCC GTGGTATTGG TCTGCTGAAT
AAGATCCGTG CCTATGAGTT GCAGGATAAA GGCGCCAATA CGGTTGAGGC GAACGAGCAA
TTAGGTTTCC CAGCGGACAT GCGTAAATAC GATATGATCC AACCTATGCT TGAACAAATT
GGCGTAAAGC ATGTACGCTT AATGACCAAT AATCCTCGCA AAGTCAAAGC GATGAAAGAA
ATTGGCATCG AAGTGGTTGA GCGTGTTCCC TTGCAAGTCG GTAAGAACCG TTACAATGAA
GCTTACTTAA AGACCAAATC CACTGAACTT GGCCATATGA TGTCTGAGTA TCATTTTACG
GATGAAGATT AG
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| Protein sequence | MSIKYVATSK LPTPWGVFAM HGFEDTETGK EHVALTFGTL SSDAPVLGRI HSECLTGDAL
FSLRCDCGFQ LQTAMQNIAE TGSGFILYLR QEGRGIGLLN KIRAYELQDK GANTVEANEQ
LGFPADMRKY DMIQPMLEQI GVKHVRLMTN NPRKVKAMKE IGIEVVERVP LQVGKNRYNE
AYLKTKSTEL GHMMSEYHFT DED
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