| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2435 |
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| Symbol | |
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| ID | 4253006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2897742 |
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| End bp | 2898851 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119067 |
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| Product | L-sorbosone dehydrogenase (SNDH) |
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| Protein accession | YP_734563 |
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| Protein GI | 113970770 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.216598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00191889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCGTA AACTGCAAAT AACTCTCGCC GCACTTTTTG CTTTAACTGG AGTGAGTGTT
CCGGCGATGG CCAAGAATAT CTTAGATAAA CTGACGGTTG CCGAAGGTTT TAATGTGAGT
TTATTCGCTG ATGACGTTGA AAATGCGCGC GAAATTGCCG TATCCGATAA AGGTATCGTT
TATGCGGGGT CGATGAAGGC GGGGAATGTT TATGCCCTAA TCGACCGCAA CCAGGACGGC
GTTGCCGATG AGAAAATCCT GGTTGCCTCA GGGCTTAAGC TACCTTCGGG CGTGGTCATC
AAAGATGGCG ATCTGTATGT CTCTGAAGTC GAGCGCATTA TTCGATTCAA GGATATAGAC
AACAATTTAA ACTCTCCCAA ATTTGAGATG GTGTTTGATG GATTTCCAAG TGAAACCCAC
CATGGCTGGA AAGTGTTAGG GGTTTCCCCG ACAGGCGAGT TAATCATTCC AGTGGGCGTG
CCCTGTAATG TGTGCGCGGA GAATGAACGC TATGGGCGCA TTTTCTCGCT GAATCTTGAG
ACCAAAAAAT TAACCACTAT CGCCCAAGGC GTTCGTAATT CCGTCGGGTT TGATTTTCAG
CCCGGCACTC AAACTCTTTG GTTTAGCGAT AATGGCCGCG ACATGATGGG CGATGATATT
CCTCCCTGCG AAATCAATAA GGTCAGTTAC TTGGGTGAAC ATTTTGGTTT CCCTTATGTG
CATGCTGGCA CGATTCTCGA CCCTGAGTTT GGCAATGGTA ACGATCCCGC CAAGTACACT
GCACCTGCGC TTTCCTTAGG CGCGCATGTG GCACCGCTGG GCATTCATTT TTATCTTGGT
AAACAGTTCC CTAGCGACTA TCAACAACAG TTGTTTGTGG CCGAGCATGG TTCGTGGAAT
CGCACTAAGA AAGCGGGCTA TAAAGTTGCC GTGGCGACGA TAGAGCAAGG CAAGGTGGTC
AAATACACCA CATTTTTAAC TGGCTTTATG CAGGATGAAC AAACCTTTGG TCGCCCTGTG
GCCTTTGCCG AATTGGCAGA TGGCAGTTTA CTGGTGTCGG ATGATTATGC GGGGGCAATT
TACCGTGTGA CTTATCCGCA GACAAAGTAG
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| Protein sequence | MVRKLQITLA ALFALTGVSV PAMAKNILDK LTVAEGFNVS LFADDVENAR EIAVSDKGIV
YAGSMKAGNV YALIDRNQDG VADEKILVAS GLKLPSGVVI KDGDLYVSEV ERIIRFKDID
NNLNSPKFEM VFDGFPSETH HGWKVLGVSP TGELIIPVGV PCNVCAENER YGRIFSLNLE
TKKLTTIAQG VRNSVGFDFQ PGTQTLWFSD NGRDMMGDDI PPCEINKVSY LGEHFGFPYV
HAGTILDPEF GNGNDPAKYT APALSLGAHV APLGIHFYLG KQFPSDYQQQ LFVAEHGSWN
RTKKAGYKVA VATIEQGKVV KYTTFLTGFM QDEQTFGRPV AFAELADGSL LVSDDYAGAI
YRVTYPQTK
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