Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2421 |
Symbol | lpxK |
ID | 4252992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2882863 |
End bp | 2883870 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638119053 |
Product | tetraacyldisaccharide 4'-kinase |
Protein accession | YP_734549 |
Protein GI | 113970756 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTAC TGGTAAATAA AATTTGGTAC GAGGGCCACC CATTGCGGTG GCTCTTGCTG CCGTTTTCTG TGCTATTTGC TTTAATCACC GCCATCCGAC GCAGCCTGTT TCGCTTGGGA CTCAAATCCC AAACCCCATT ACCCGTGCCC GTTATTGTGG TGGGTAACAT TACCGTTGGT GGCAGCGGTA AAACCCCCAC AGTCATTTAT TTGATTGAAT TGCTACGGCA ACAGGGGTTT AACCCTGGCG TTATCAGCCG TGGTTATGGT GCGGATATGC AAGGGGTAAA AGTCGTTACC GCAGCGGATA GCGCGGCGTC TGTGGGCGAT GAGCCTGCCA TGATAGTGGC GCGCACCGGC GTACCGATGG TGGTGGGAGC CAAACGTGTC GATACCGCCA AGGCCTTGCT GGCACAGTTT GCCGTGGATG TAATTATCTG TGACGATGGC TTGCAACATT ACGCCCTTGG CCGCGATATT GAGCTGGTGG TCATTGATGG AAAACGCGGT TTAGGGAATC GTCATTTGCT TCCCGCAGGG CCGCTACGAG AAGGTGCTTG GCGCCTTAAT CAAGTCGATT TTGTAGTGGT TAATGGTGGG CCCGCGCAGG CCAATCAATA TGAGATGCAA CTCAGTCCTA GCGCTGTGCT GCCGGTGAAT CCCAAGGCAG TGGCCGTGTT TGACCCAACG CAACCCGTGG TCGCGATGGC GGGCATTGGC CATCCTGCAC GTTTTTTTGA GACGTTAACC CAGCAAGGCT TTCAACTCGC GTTATCTCAT GGCTTTGACG ACCACCAAGC CTACGATAAA GAAGTGTTAT GCGAGCTTGC GGCATCTCGG CCGCTGATGA TGACAGAAAA AGATGCGGTT AAATGTCGCG ATTTTGCACA AGAAAACTGG TGGTATTTGG CCGTGGATGC CAAGCTATCG CCACAATTTG ATCAACAGCT GCTGAGCCGT GTACGCTCTG TGGCTGCAGC TAAACAAGGA AAATCCCATG GCGTTTGA
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Protein sequence | MQVLVNKIWY EGHPLRWLLL PFSVLFALIT AIRRSLFRLG LKSQTPLPVP VIVVGNITVG GSGKTPTVIY LIELLRQQGF NPGVISRGYG ADMQGVKVVT AADSAASVGD EPAMIVARTG VPMVVGAKRV DTAKALLAQF AVDVIICDDG LQHYALGRDI ELVVIDGKRG LGNRHLLPAG PLREGAWRLN QVDFVVVNGG PAQANQYEMQ LSPSAVLPVN PKAVAVFDPT QPVVAMAGIG HPARFFETLT QQGFQLALSH GFDDHQAYDK EVLCELAASR PLMMTEKDAV KCRDFAQENW WYLAVDAKLS PQFDQQLLSR VRSVAAAKQG KSHGV
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