Gene Shewmr4_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2413 
Symbol 
ID4252984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2875266 
End bp2875613 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content48% 
IMG OID638119045 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_734541 
Protein GI113970748 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00307776 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC ACAGCATTAA TTATTTAGAA ATCCCCACCA CAGATATTAG CCGCTCCAAG 
ACCTTCTTTA ATACGGTATT TGGTTGGCGT TTTGAGGATT ACGGGCCGCA GTACAGCTGT
TTTATTGATG TGGGGATCAC CGGAGGTTTT TACCAAGCTG AGGTGAGTTT TAACCTCGAA
AAAGGCTGCC CGCTGATTGT GTTATACAGC AAGGATTTAG AGCAGACACA AGCGGCGGTG
AAGGCGGCTG GCGGTGTAAT CAGCACGGCG ATTTTCAGTT TTCCCGGTGG ACGGCGTTTC
CATTTTATCG AGCCTGCGGG CAACGAATAT GCGGTCTGGT CAGAGTAA
 
Protein sequence
MDHHSINYLE IPTTDISRSK TFFNTVFGWR FEDYGPQYSC FIDVGITGGF YQAEVSFNLE 
KGCPLIVLYS KDLEQTQAAV KAAGGVISTA IFSFPGGRRF HFIEPAGNEY AVWSE