| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2411 |
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| Symbol | |
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| ID | 4252982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2874092 |
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| End bp | 2874982 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119043 |
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| Product | cytidine deaminase |
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| Protein accession | YP_734539 |
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| Protein GI | 113970746 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0893764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATA GATTTATCAG AAGCATAACC CAGCTGCCAA CACCATTGGC TGACGCATTA
ATTCCCCTAT TACATCAAAA CTTTGCGGGA CATATTGATG CGCAGCAACT GGCAGAGTTA
GTCCAAAGCA GCAAAATGAC CGAAGCCGAA GTGTTACTGG CTCTGCTGCC TATAGCCGCC
GCCTTAGCAA AACCGCCGAT CAGCGAGTTT TATGTCGGTG CGATTGCTAA AGGGAAAAGT
GGCGACATCT ATATGGGCGC CAACCTAGAA CTGCCCGGCG AAGCCCTGTT TCACTCTGTA
CATGCAGAGC AAAGCGCCAT CAGCCACGCA TGGTTAAGTG GCGAGAGCCA AATTGTCGAC
ATGATCGTTA ACGCCAGCCC CTGTGGTCAT TGCCGTCAGT TTATGAACGA ACTCGTCGAG
GGTGGCCAAA TTAAGATCCA TCTGCCATCG CAAGACAGTC ATTTACTGTC CTATTACTTA
CCCTACGCAT TTGGGCCAAA GGACTTAAAT GTGCAGTCGC CCTTGCTGGT CAAGCATGAA
ACCGAATTTG CCCTCGATAG CAGCGATCCT ATGGTGATTG AAGCATTAGA TCATGCAGGC
CTAAGTTACG CGCCTTATAC CCAAAGTTAT GCCGCTGTAG TACTCGAAAC CTCAGATGGT
GCAACCTATT GTGGCCGCTA CGCTGAAAAC GCAGCCTTTA ACCCATCTAT GCTACCAATG
CAGATGGCCC TATCGAATCT CACTCGACAT AACCGTGATT TTGGCGAGAT CCGCCGCGCG
GTGTTGGTCG AGTCATCACA GGGGAAAATC AGCTTAGTGG GCGCAACCAT GGATGCCTTA
CATGCCGTTG CCGCCATCGA ACTTGAGCAT ATAGTGGTCG ATCCTGTCTG A
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| Protein sequence | MQDRFIRSIT QLPTPLADAL IPLLHQNFAG HIDAQQLAEL VQSSKMTEAE VLLALLPIAA
ALAKPPISEF YVGAIAKGKS GDIYMGANLE LPGEALFHSV HAEQSAISHA WLSGESQIVD
MIVNASPCGH CRQFMNELVE GGQIKIHLPS QDSHLLSYYL PYAFGPKDLN VQSPLLVKHE
TEFALDSSDP MVIEALDHAG LSYAPYTQSY AAVVLETSDG ATYCGRYAEN AAFNPSMLPM
QMALSNLTRH NRDFGEIRRA VLVESSQGKI SLVGATMDAL HAVAAIELEH IVVDPV
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