| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2397 |
|---|
| Symbol | |
|---|
| ID | 4252968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2857527 |
|---|
| End bp | 2858453 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638119029 |
|---|
| Product | [Acyl-carrier-protein] S-malonyltransferase |
|---|
| Protein accession | YP_734525 |
|---|
| Protein GI | 113970732 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000105651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG TAGCTTTTGT ATTCCCAGGC CAAGGTTCTC AGGCCCTAGG CATGTTAGCC
GAGTTAGCTG GTGCACAGCC GATTGTGGGA CAAACCTTTG CCGAAGCGAG TGAGGTGTTA
GGGTATGATC TGTGGGCATT AGTGCAAGAC GGCCCCGTTG AAACCTTAAA TGAAACCGAT
AAAACCCAGC CTGCTTTATT AGCGGCAAGT GTGGCCATTT GGCGCGCTTA CGTTGCTTCA
GGTAAAGCCA TGCCTGCGAT GTTAGCGGGT CACAGCCTAG GCGAATATTC TGCATTAGTT
TGTGCCGGTG TCATCGACTT TAAAGATGCG ATCAAACTGG TTGAGCTACG TGGTCAACTG
ATGCAGCAAG CCGTGCCAGC GGGTACTGGC GCTATGTACG CGATTATCGG TCTTGATAAT
GACGGTATTG CTAATGCGTG TATTGAAGCT GCCCAAGGCG AAGTGGTGAG CCCAGTTAAC
TTCAACAGCC CAGGTCAAGT GGTTATCGCC GGTCAAAAAG AGGCGGTTGA GCGTGCAGCT
GCTGCCTGTA AAGCGGCGGG CGCCAAAATG GCGGTTGCCC TGCCTGTCAG CGTGCCATCA
CATTGCGCAT TAATGAAACC TGCGGCTGAT AAACTAGCCC TTGCTTTGAA CGATGTGCAG
TTTAATGCGC CAAGCATCAC TGTTATCAAT AACGTGGATG TCGCATCACC CACTGCGGTC
GCTGACATTA AAGATGCGCT TGTTCGTCAA CTTTATTGCC CAGTGCGCTG GAGCGAAACT
GTTGAATTAA TGGCCGAAAA AGGTATTACA CAGTTAGTTG AGTGTGGCCC TGGTAAAGTA
TTGACAGGTC TTGCGAAACG CATTAATAAA TCTCTTTCTG CCCAAGCAGT TAATGACGTT
GCATCCCTTG CCGCGTTAAC TGAATAA
|
|---|
| Protein sequence | MENVAFVFPG QGSQALGMLA ELAGAQPIVG QTFAEASEVL GYDLWALVQD GPVETLNETD
KTQPALLAAS VAIWRAYVAS GKAMPAMLAG HSLGEYSALV CAGVIDFKDA IKLVELRGQL
MQQAVPAGTG AMYAIIGLDN DGIANACIEA AQGEVVSPVN FNSPGQVVIA GQKEAVERAA
AACKAAGAKM AVALPVSVPS HCALMKPAAD KLALALNDVQ FNAPSITVIN NVDVASPTAV
ADIKDALVRQ LYCPVRWSET VELMAEKGIT QLVECGPGKV LTGLAKRINK SLSAQAVNDV
ASLAALTE
|
|---|
| |