| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2386 |
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| Symbol | |
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| ID | 4252957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2845814 |
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| End bp | 2848042 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119018 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_734514 |
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| Protein GI | 113970721 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000185534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATCTC GTTTTGCCTA TTCAATACTA ACGCTTGCCC TGATGCCGCA TTTGGTCTTG
GCGGCAGCGT CTAACGCTCA AGAGAGCAAA CCCGAGCAAG AAAATGCTTC AGCGGCACAA
GCCGCTACCC AAGCAAGCAC TCAAGCTTTA GCGCAAACCA GTGCTCAGAC TGACACTAAA
GCGCCCGAGC GGATTGTGGT ACGTGGTCGC GCCATGCAAA TGTACGTCGA TAAAGAGACG
GAAATTGGTA CAAAAACGGC AATCAATGTG ATGGAGCTGC CGCAGTCGGT ACAAGTGCTG
ACCGAACAAC TGATTGACGA CCAAGCCGCT CGCAATATTA CCGACTTATA CCGCTCCATA
GCGGGGGTAA GTGAATTTAG CTATTCCGGT GTGACCTTTC GTGGCTTTCG CGACGATGCC
AACGTGTTTT ACGACGGCGT ACGTGGCGAT CCGTATTCCG GCTTTTCGGT GCCACAACTG
TTCAACGTGC AGCGGGTTGA AGTGTTAAAA GGCCCCGCAT CGGCACTCTA TGGCGGCGGT
GAACCCGGCG GCATGATCAA CTATGTCACT AAAAAGCCGA CGTTTGTTGA GCGTAAAGAG
CTCACCCTAA GCACAGGCAG TTACGACATG ATGGGCGGCT CGCTGGATTT CACCGGTGGC
TTAACTGAGG ATTTAGCCTA TCGTTTAGGG GGCTATTATC AGCAGGAAAA TAGCTTTCGT
AACAATGCCG ATAGCATGAA TGCCGAAGTG GCGGGTGGCT TACTGTATGA AATCAGTGAA
GATACCAAGC TCACCACCAC ATTCGATCTG ATCAAACAGG ATTTGGGCGG TAATCGACTC
CGTGGTGTAC CCGTGGATGA TGCGGGGAAT TTCCTGGTTG ATCCTTCCTA CAATGCTAAC
GAGAAGAGCG ACTTCCAAAA GATGGATGCT TTGGTGCTGC AAGCGATTCT CGATCATCAA
TTTACGGATG ATTTTTCGGT GAAAACGCAG CTCCGTTATC TCACGAATGA CTCCGATCAG
CAGTACCACG AGTCCCGAGG TTGGGTTGAT GTCAACGGTG ATGGCAAAGC TAACAGCGCG
GATGGCACGA TCAAACGTGA ATATCGGGTG CAAGCCCGTG CTAATGATGA AATCAGTTTA
ACCAATGACT TTGTTTATCG TTTTAATGCC TTAGGTTTTG AGCATGAGTT CCTGTTCGGC
GGCGATTATC ACTATGTTGA AACCGAGTAC CATTACAAAC TGGCGACGGA TAAAACCGGC
GTCGGTAACC TGAATATTTA TGAGCTTAAC TACGGTGAGA CTGATCCTAG TACTTATCAG
TTAAAAGACA TGGATACTGA CGGTACCCGT GCCAACCGTT TTGGCCTGTA TCTGCAAGAG
CATCTGCATT TTAACGAACA GTGGTCACTG ATTGCGGGTC TGCGTTTTAG CCAGTTTGAA
GATTACAACA AGAAGACCGG ATTCTCCTTT AGCGATAATG CCATTACCCC AAGGGCGGGC
CTGAATTATC GTCCACTCGA GTCTATGTCC TTTTACTTGA ACTATTCAGA GAGCTTTAAT
CCCGCCTCAT TGAGCGATCA GGAGCAGGAA GGGGGTGATG GTTATCTTGA CCCTGAAACC
GGTAATCAAA TTGAGCTTGG GATGAAAAAC GAGTGGTTGG ATGGCCAGTT TATGACCACA
CTCGCGCTCT ATCGTATTGA AAAACAAAAC GTGGCTCAGG CGAACCCGCT CGATACCGGC
AAGGATGATG GAATTCCTGA CTTAGTGAAT TTAGGCGAAG TGCGCAGTCA AGGCGTCGAA
TGGACGCTGG TGGGGGACTT AACCGATAAC CTGACCATGA CCGCTAACTA TGCCTATAAC
GATACCGAAG TGATCAAAGG CGTGACCAAC GACAGCCTGA CCAACACCTT CGGTGGCGGT
AAACGTTTTG CCAATGCGCC GCGACATCAA GCAGGGTTAT GGACACGCTA TGATATTCAA
GCGATTGATT CGGCCATCGC CTTTGGGATG GACTATGTGG GCGAGCAATT TAGCCTCAAT
GGTCAAACGG TAAAACCCCA TACTGTGTTT GATATGAGCT GGACGACCCA GTGGGACCAA
ACCCAAGTGC GCGTAAATCT GAAGAATATC TTCGATAAGG AATATGCTGT CAGCGGATTT
AGTGAGCGCA ATGGTCATTT CCCTGGCGAG CCTCGCAATG TCACACTTGA ACTGAGCCAT
AAGTTCTAG
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| Protein sequence | MKSRFAYSIL TLALMPHLVL AAASNAQESK PEQENASAAQ AATQASTQAL AQTSAQTDTK
APERIVVRGR AMQMYVDKET EIGTKTAINV MELPQSVQVL TEQLIDDQAA RNITDLYRSI
AGVSEFSYSG VTFRGFRDDA NVFYDGVRGD PYSGFSVPQL FNVQRVEVLK GPASALYGGG
EPGGMINYVT KKPTFVERKE LTLSTGSYDM MGGSLDFTGG LTEDLAYRLG GYYQQENSFR
NNADSMNAEV AGGLLYEISE DTKLTTTFDL IKQDLGGNRL RGVPVDDAGN FLVDPSYNAN
EKSDFQKMDA LVLQAILDHQ FTDDFSVKTQ LRYLTNDSDQ QYHESRGWVD VNGDGKANSA
DGTIKREYRV QARANDEISL TNDFVYRFNA LGFEHEFLFG GDYHYVETEY HYKLATDKTG
VGNLNIYELN YGETDPSTYQ LKDMDTDGTR ANRFGLYLQE HLHFNEQWSL IAGLRFSQFE
DYNKKTGFSF SDNAITPRAG LNYRPLESMS FYLNYSESFN PASLSDQEQE GGDGYLDPET
GNQIELGMKN EWLDGQFMTT LALYRIEKQN VAQANPLDTG KDDGIPDLVN LGEVRSQGVE
WTLVGDLTDN LTMTANYAYN DTEVIKGVTN DSLTNTFGGG KRFANAPRHQ AGLWTRYDIQ
AIDSAIAFGM DYVGEQFSLN GQTVKPHTVF DMSWTTQWDQ TQVRVNLKNI FDKEYAVSGF
SERNGHFPGE PRNVTLELSH KF
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