| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2382 |
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| Symbol | |
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| ID | 4252953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2839534 |
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| End bp | 2840280 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119014 |
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| Product | UMP phosphatase |
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| Protein accession | YP_734510 |
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| Protein GI | 113970717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0204611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTCCTGC ACGACAATAA GCTGATCCCC
GGCAGTGATA AATTTATCCA CCGCGTTCTC GACCAAGGCA ATCCCCTCGT TATTCTGACC
AATTACCCGG TACAAACGGG CAAAGATCTG CAAAATCGCC TCAGCGCCGC CGGGATAGAC
GTACCAGAAG AATGTTTTTA CACCTCTGCC ATGGCCACCG CCGACTTTTT AAAGCATCAG
GAAGGCAGTA AAGCTTTTGT GATTGGTGAA GGCGCCCTCA CCCATGAGCT CTACAAGGCA
GGCTTTACCA TTACTGACAT TAATCCCGAC TTTGTGATTG TGGGTGAAAC CCGCTCCTAT
AACTGGGATA TGATCCATAA GGCCGCAGGA TTTGTCGCCC GCGGTGCCCG TTTTATTGCC
ACCAATCCCG ACACTCACGG CCCCGCTTAC AGTCCGGCCT GCGGCGCCCT GTGTTCACCG
ATAGAGCGGA TTACTGGCAA AAAGCCCTTT TATGTGGGCA AGCCCAGCTC GTGGATTATC
CGCTCGGCGC TCAACCATAT CAACGGTCAT TCCGAAAATA CCGTGATCAT TGGCGACAAT
ATGCGCACCG ATATTCTGGC GGGGTTTCAA GCGGGGCTTG AGACCATTCT GGTCACCAGC
GGCGTGAGCA AGCTTGAAGA TATCGATAAA GAGCCTTTCC GCCCTAATCA TGTATTCGCC
TGCGCTGGCG ATATTGATGT AGTTTAA
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIHRVL DQGNPLVILT NYPVQTGKDL QNRLSAAGID
VPEECFYTSA MATADFLKHQ EGSKAFVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWDMIHKAAG FVARGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSSWII
RSALNHINGH SENTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV
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