| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2375 |
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| Symbol | |
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| ID | 4252946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2832747 |
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| End bp | 2833415 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119007 |
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| Product | ribonuclease T |
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| Protein accession | YP_734503 |
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| Protein GI | 113970710 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000351163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.329752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA TTAGCGACGC AAACAAATTG AAACACCGAT TTCGAGGCTA CTTTCCGGTT
GTCATAGATG TCGAAACGGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT AGAAATAGCC
GTCACGCTGT TAAAAATGGA TGATGAAGGC TTGCTCGGGA TTGATAAAAC CCTGCATTTC
AACATTGAGC CCTTTGAAGG CGCAAATTTA GAGCCCGAAG CTCTGGCCTT TAATGGTATT
GATCCCACCA ACCCATTACG GGGCGCCGTA AGCGAAAAGG AAGCTTTTTT AGAGATTTTC
AAAGCCGTTA AAAAAGCGCA GAAGGCCTCC GATTGTCACC GCAGTATTAT CGTGGCGCAC
AATGCCGCCT TCGATCATGG CTTTGTGAGT AAAGCGATTG AGCGTTGTGA CTTAAAACGC
TCACCCTTCC ACCCTTTTGC CACCTTTGAT ACGGCAACAC TCGCAGGCTT AGCTATCGGC
CATACCGTGC TGGCCAAAGC CTGCATCATG GCGGGGATCC CCTTTGATAA TAAAGAAGCT
CATTCAGCAC TTTACGATAC CGAGCGCACG GCGGAGCTGT TTTGCTATAT AGTCAACCGC
TGGAAGCATT TAGGCGGTTG GCCACTCTTA GCCGCTGGTG AGTCAGAGGA TACAGATGGT
GAAGAATAA
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| Protein sequence | MSDISDANKL KHRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDDEG LLGIDKTLHF
NIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA
HSALYDTERT AELFCYIVNR WKHLGGWPLL AAGESEDTDG EE
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