| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2367 |
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| Symbol | |
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| ID | 4252938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2824131 |
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| End bp | 2824667 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118999 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_734495 |
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| Protein GI | 113970702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000270429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.157295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTGA ACAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTATTAGT
GCGTGTAGCT CAACTTCTGA ATCAGAAACT GATGCAATGG GCTCTACAAG CGGTTCTGGT
AGCGAACTGA ATGGTGGTGG CGTTCAAACT GGCGGTATTG GTGGAATGTT GTCACCTGAA
GAGCAACAAC GTCAGCAACT CGAGCAGTTG AGAAAAGAAC ACATCATTTA CTTCGACTTC
GACCGCAGTG AAGTTCAAAC TGAATTTGCT GCTGTACTGG AAGCCCACGG TACTTATTTA
GTTGAGCACC CAAGCGTACG CGTATTGATT GAAGGTCATG CCGACGAGCG TGGCACACCA
GAATACAACA TCGCACTGGG TGAGCGTCGT GCTAAAGCTG TTGCTAAATA CTTACAAGGC
ATGGGTGTAC AACCTAGCCA AATGAGCATC GTAAGCTATG GCGAAGAGAA GCCACTTGAC
TTCACTCGTA CCGATGAAGG TTTTGCTAAA AACCGTCGTG CAGTTTTAGT TTACTAA
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| Protein sequence | MDLNKLLKAM LVALPIMAIS ACSSTSESET DAMGSTSGSG SELNGGGVQT GGIGGMLSPE
EQQRQQLEQL RKEHIIYFDF DRSEVQTEFA AVLEAHGTYL VEHPSVRVLI EGHADERGTP
EYNIALGERR AKAVAKYLQG MGVQPSQMSI VSYGEEKPLD FTRTDEGFAK NRRAVLVY
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