| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2356 |
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| Symbol | bioD |
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| ID | 4252927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2807196 |
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| End bp | 2807891 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118981 |
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| Product | dithiobiotin synthetase |
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| Protein accession | YP_734484 |
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| Protein GI | 113970691 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000168324 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTTTTG TAACAGGAAC AGATACCGAC AGCGGAAAAA CCTTAGTGTT GACCGCACTC
TTGACCGCTT TCAATCGTGA GGCTGCTCGC ACAGGCGCTA TGCATTTAAG TCTTGGAGTA
AAACCTGTGG CATCGGGTTG TGAAACCACA GAGCAGGGTT TACGTAACAG TGATGCGTTG
AAACTGATGT CGGCCTCATC TTTAAAACTT AGTTATGAGC AGGTCAACCC AGTGAGTTTT
GAGCCTGCCA TCGCACCGCA TATTGCCGCA AAACAGCTGG GGATTAACAT ATCGCCAGAG
GCGATTTTGG CAAAACTAGA CAGACAAGCC TTTGAGCGGG CTGATTTTTG CTTGATAGAA
GGTGCGGGCG GCTGGCGTTT ACCCTTAGGG GACGGACGTT ATTTATCGGA ATTAGTGCAG
CAGCTTAATT TGCCGGTGAT CTTGGTTGTG GGGATGAAAC TTGGCTGCCT AAATCATGCC
TTATTAACCC AAGAGGCGAT AATGGCCGAT GGCTTAACCG TAGCGGGTTG GGTGGCAAAT
TGTGTCGATC CCAATATGAG TGTGTTCGAT GAAAACTTAG TGTCGCTCAA AGAGATGATG
ACGGCGCCAT TTCTTGGCTG TATTCCTCAT CTAACACAAG CGGATGCGGA GCATGCCGCC
AACTTTATTG ATATTCAGCC CTTATTGATG AAATAG
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| Protein sequence | MFFVTGTDTD SGKTLVLTAL LTAFNREAAR TGAMHLSLGV KPVASGCETT EQGLRNSDAL
KLMSASSLKL SYEQVNPVSF EPAIAPHIAA KQLGINISPE AILAKLDRQA FERADFCLIE
GAGGWRLPLG DGRYLSELVQ QLNLPVILVV GMKLGCLNHA LLTQEAIMAD GLTVAGWVAN
CVDPNMSVFD ENLVSLKEMM TAPFLGCIPH LTQADAEHAA NFIDIQPLLM K
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