Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2352 |
Symbol | |
ID | 4252923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2802762 |
End bp | 2803472 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118977 |
Product | peptidase E |
Protein accession | YP_734480 |
Protein GI | 113970687 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3340] Peptidase E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000105319 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000548128 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGTCA ATGCCCTACT GCTTAGCAGT TCACGCGTCG GTGATACGCC TTACCTTTCC CATGCGATTC CCTTTATCAA ACCGCTCACC ACTAACGCCC AAAAATGGAT TTTTATTCCC TATGCCGGTG TCAGCATGAG TTACGACACT TATTTAGCCT CAGTCGTAGC GGGATTAAGT GAACTTAGGC TCGATATCAG CGGCATTCAC CAGCATCCCG ATCCGCGCCA AGCGATTAAA GATGCCGATG GCATTTTGAT CGGTGGTGGT AACACCTTTC ATTTATTGCA CGAGCTCTAT AAGTATGATT TAGTGCATCT TATTCGTGAA GAAGTGATGA ATGGCAAGCC TTATATTGGC TGGAGCGCAG GCTCTAACGT CTCGGGACTG AGCATTCGCA CCACCAACGA TATGCCGATT ATCGAGCCAC CTTCGTTTAC CGCGCTAAAT ATTGTGCCGT TTCAGTTAAA TCCACATTAT TCAAACTACC GCGCACCGGG ACATAACGGC GAAACCCGCG CCCAGCGCTT ACTCGAATTC ACTCGCGTCG ATCCTATCAC CCCAGTTGTG GGTATTGTCG AGGGCAGCGC ACTCTGGCGT CAGGGTGAAA CCTTATCCCT ACTCGGTGAC AATCCGGCCT ATTTATTCTG TGGTGAGCAG CAAGAAATCC CCATCCCTGT GGGCAGCGAT TTATCCCATT TACTGAAATA A
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Protein sequence | MTVNALLLSS SRVGDTPYLS HAIPFIKPLT TNAQKWIFIP YAGVSMSYDT YLASVVAGLS ELRLDISGIH QHPDPRQAIK DADGILIGGG NTFHLLHELY KYDLVHLIRE EVMNGKPYIG WSAGSNVSGL SIRTTNDMPI IEPPSFTALN IVPFQLNPHY SNYRAPGHNG ETRAQRLLEF TRVDPITPVV GIVEGSALWR QGETLSLLGD NPAYLFCGEQ QEIPIPVGSD LSHLLK
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