Gene Shewmr4_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2351 
Symbol 
ID4252922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2801611 
End bp2802474 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID638118976 
Productheat shock protein HtpX 
Protein accessionYP_734479 
Protein GI113970686 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000133306 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000558904 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCGTA TTTTTTTATT AATTGCGACT AACCTAGCCG TGTTGCTGGT AGCCTCAATT 
GTGATGTCTA TTCTGGGCGT GAATACGTCT ACTATGGGTG GACTGTTAGT GTTCGCTGCG
ATTTTTGGAT TCGGCGGAGC CTTCATCAGC TTAGCCATTT CAAAATGGAT GGCGAAAAAG
ACCATGGGCT GTGAAGTGAT CACCACGCCA CGTGATAGCA CTGAGCGTTG GTTATTGGAA
ACGGTTGCCC GTCAAGCGCA ACAAGCTGGA ATTAAAATGC CAGAAGTGGC GATTTACCAG
TCACCAGAAA TGAACGCCTT TGCCACAGGC CCAAGCAAAG ACAACTCATT AGTCGCCGTG
AGTACCGGTC TGTTATACGG TATGAGCCAA GACGAAGTAG AAGGGGTTCT CGCCCACGAA
GTGAGCCACG TCGCCAACGG CGATATGGTG ACTCTGACCT TAATTCAAGG CGTAGTGAAC
ACCTTTGTTA TCTTTGCGGC GCGTGTTGTT GCGGGCATTA TCAATAACTT CGTATCGAGC
AACGATGAAG AAGGTGAAGG TTTAGGCATG TTCGCTTATA TGGCGGTCGT GTTTGTCCTC
GACATGTTGT TTGGTATCTT GGCCTCGATT ATCGTGGCTT ACTTCTCACG TATCCGTGAA
TACCGTGCTG ACGAAGGTGC AGCACGTTTA GCGGGTAAGC ATAAGATGAT TGCAGCGCTT
GAGCGTTTAC GCCAAGGCCC TGAAAGCTCG GCAATGCCAG CACAAATGTC AGCCTTCGGT
ATTAACGGCA AGCGTTCAAT GGCTGAGCTG ATGATGAGCC ACCCGCCATT AGAGAAGCGT
ATCGCCGCTT TACAGACCCG TTAA
 
Protein sequence
MKRIFLLIAT NLAVLLVASI VMSILGVNTS TMGGLLVFAA IFGFGGAFIS LAISKWMAKK 
TMGCEVITTP RDSTERWLLE TVARQAQQAG IKMPEVAIYQ SPEMNAFATG PSKDNSLVAV
STGLLYGMSQ DEVEGVLAHE VSHVANGDMV TLTLIQGVVN TFVIFAARVV AGIINNFVSS
NDEEGEGLGM FAYMAVVFVL DMLFGILASI IVAYFSRIRE YRADEGAARL AGKHKMIAAL
ERLRQGPESS AMPAQMSAFG INGKRSMAEL MMSHPPLEKR IAALQTR