Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2342 |
Symbol | bcp |
ID | 4252913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2792646 |
End bp | 2793113 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118967 |
Product | thioredoxin-dependent thiol peroxidase |
Protein accession | YP_734470 |
Protein GI | 113970677 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0931476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000479229 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACAT TAACCGCTGG CGCGAAAGCG CCGCTATTTA CCCTTCAAGA TCAACAGGGT AATGCAGTTT CCCTACAAGA ATGCTTAACG CGCGGCCCGG TTTTAGTCTA CTTTTACCCT AAGGCTTCAA CCCCTGGCTG CACAGTGCAA GCCTGTGGTT TACGTGACAG CAAAGCCGAA CTCGACAGCC ACAAAGTGAC CGTGCTTGGC ATTAGCCCTG ATCCCGTAGC TAAATTAGCT AAGTTTGCAG AAAAACAGTC GCTTAACTTT ACCCTGCTTA GCGATGAAGA CCACAGCGTC GCCGATGCCT TTGGCGTGTG GGGCGAGAAG AAATTTATGG GCAAAATCTA CGACGGTATC CATAGATTGA GTTTCCTCAT CAACACCGAC GGCACCATTG CCCATGTGTT CGATAAGTTT AAAACCAGCG ATCATCACCA AGTTGTGCTG GCGCAAGTTG CTGGTTAA
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Protein sequence | MNTLTAGAKA PLFTLQDQQG NAVSLQECLT RGPVLVYFYP KASTPGCTVQ ACGLRDSKAE LDSHKVTVLG ISPDPVAKLA KFAEKQSLNF TLLSDEDHSV ADAFGVWGEK KFMGKIYDGI HRLSFLINTD GTIAHVFDKF KTSDHHQVVL AQVAG
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