Gene Shewmr4_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2342 
Symbolbcp 
ID4252913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2792646 
End bp2793113 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content49% 
IMG OID638118967 
Productthioredoxin-dependent thiol peroxidase 
Protein accessionYP_734470 
Protein GI113970677 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0931476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000479229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACAT TAACCGCTGG CGCGAAAGCG CCGCTATTTA CCCTTCAAGA TCAACAGGGT 
AATGCAGTTT CCCTACAAGA ATGCTTAACG CGCGGCCCGG TTTTAGTCTA CTTTTACCCT
AAGGCTTCAA CCCCTGGCTG CACAGTGCAA GCCTGTGGTT TACGTGACAG CAAAGCCGAA
CTCGACAGCC ACAAAGTGAC CGTGCTTGGC ATTAGCCCTG ATCCCGTAGC TAAATTAGCT
AAGTTTGCAG AAAAACAGTC GCTTAACTTT ACCCTGCTTA GCGATGAAGA CCACAGCGTC
GCCGATGCCT TTGGCGTGTG GGGCGAGAAG AAATTTATGG GCAAAATCTA CGACGGTATC
CATAGATTGA GTTTCCTCAT CAACACCGAC GGCACCATTG CCCATGTGTT CGATAAGTTT
AAAACCAGCG ATCATCACCA AGTTGTGCTG GCGCAAGTTG CTGGTTAA
 
Protein sequence
MNTLTAGAKA PLFTLQDQQG NAVSLQECLT RGPVLVYFYP KASTPGCTVQ ACGLRDSKAE 
LDSHKVTVLG ISPDPVAKLA KFAEKQSLNF TLLSDEDHSV ADAFGVWGEK KFMGKIYDGI
HRLSFLINTD GTIAHVFDKF KTSDHHQVVL AQVAG