| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2337 |
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| Symbol | |
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| ID | 4252908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2785386 |
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| End bp | 2788481 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638118962 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_734465 |
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| Protein GI | 113970672 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0120926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000298899 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCTGA CAGATCTTTC CGTTAAACGA CCGGTATTTG CCTCGGTTAT TAGCTTATTG
CTGGTGGCCT TTGGTTTAGT GGCATTCGAT AAGTTACCGC TACGGGAATA CCCTAACATC
GACCCGCCGA TTGTTTCGAT TGAAACCAAC TATCGCGGCG CCAGTGCCGC CGTGGTTGAG
AGCCGTATCA CCCAGCTGAT TGAAGATAGG ATCAGCGGCG TCGAAGGTAT TCGCCATGTG
AGTTCATCGA GCAGCGATGG TCGCTCGCAG GTGACCTTAG AGTTCGATAT CAGCCGCAAC
ATTGAAGATG CGGCCAACGA CGTACGCGAC AGAATTTCGG GCCTGTTAGA TAACTTACCC
GAAGAAGCCG ATCCCCCAGA GGTACAAAAG GCCAACGGTG GCGATGAAGT GATTATGTGG
CTCAACCTAG TGTCGGATCA AATGACCACA TTAGAGCTGA CCGATTACAC CCGTCGTTAT
TTATCCGACC GTCTGTCCGT GGTGGACGGG GTGTCGATGA TCCGTATCGG TGGTGGCAAA
GTTTACGCCA TGCGCGTGTG GCTCGATAGA CAAGCCCTTG CATCCCGAAG CCTTACAGTT
GCTGATGTTG AAGCCGCGTT AAGGGCTGAA AACGTTGAGT TGCCCGCAGG TTCGCTCGAG
TCCAAGGAGC GCCACTTTAC CGTGCGTTTA GAGCGTAGTT ATCGCACCGC CGAGGACTTT
GCCAATTTGG TGATTTCCCA AGGCGAAGAC GGCTATTTAG TCAAACTTGG CGATGTGGCA
AAGGTGGAAA TTGGCTCGGA AGAAGAGCGC ATCATGTTCC GCGGCAACAA GGAGGCCATG
ATCGGTCTTG GTGTGTCGAA ACAGTCGACC GCCAACACCT TAGAAGTGGC CCGCGCCGTT
AACGCCTTAG TCGATAAAAT CAATCCAACC TTACCCGCTG GCATGTCGAT TAAACGCAGC
TACGACAGCT CAGTGTTTAT CGAAGCCTCG ATTAAAGAGG TATACCAAAC CCTATTCACC
GCCATGGTGC TGGTGATCAT CGTGATTTAT CTGTTCCTTG GCAGCGTGCG CGCCATGTTA
ATCCCTGCTA TTACCGTGCC CGTGTCTTTG CTCGGGACGT TTATCGTCCT CTATGCGCTA
GGATACACAA TCAACCTGTT GACGCTGCTT GCGATGATCC TCGCCATCGG TATGGTGGTA
GACGATGCGA TTGTGATGTT GGAAAACATT CACCGCCGTA TCGAAGAAGG GGATTCACCC
TTAAAGGCGG CATTCTTGGG TGCCCGTGAA GTGGCCTTTG CGGTTATCGC CACCACCTTA
GTGCTAGTGG CGGTATTTAT GCCGATCACT TTCCTAGAAG GGGACTTAGG TAAGCTCTTT
AAGGAGTTTG CGGTGGCCAT GAGCGCGGCG GTGATCTTCT CCAGTATCGT GGCCTTAACC
TTAAGCCCGA TGATGTGTTC TAAGCTGCTT AAACCCGCGT CGCAGGATTC GTGGTTAGTG
CGTAAGGTCG ATAGCATTAT GACGGGGATT TCCCGTGGCT ATCAAAGCTC GCTTGAGAAG
GCGATGGCAA GACCTGTGCT GATGTCGATA TTAGTCTTGA TTGCGCTCGG GAGCAGTGTG
CTGCTCGCCC AAAAAGTGCC GCAGGAATTT GCGCCGCAGG AGGACCGGGG TTCGTTATTT
TTGATGGTGA ACGGGCCGCA GGGTGCGAGT TACGAATATA TCGAATCCTA CATGAACGAA
GTGGAAAACC GGTTAATGCC GTTGGTGGAC TCGGGAGACA TTAAACGCTT GCTGATCCGT
GCGCCCCGTG GCTTTGGCCG CGCCGCCGAC TTCTCTAATG GTATGGCGAT TATCGTGCTC
GAAGATTGGG GACAACGTCG CCCGATGAAA GAAGTGATCG GCGATATTAA CAAGCGCCTC
GCGGATTTAG CCGGTGTGCA AGCTTTCCCT GTGATGCGTC AAGCCTTTGG CCGTGGCGTG
GGTAAACCTG TGCAGTTTGT GATTGGTGGC CCAAGCTACG AAGAGTTGGC CCGCTGGCGC
GACATTATGA TGGAAAAGGC GGCGGAAAAT CCTAAATTGC TTGGCCTTGA CCACGACTAT
AAAGAGACCA AACCGCAGCT TAGAGTCGTG ATCGACAGGG ACAGGGCGGC CAGCCTTGGG
GTATCGATTT CCAATATTGG TCGCACTTTA GAATCGATGC TGGGCTCGCG TTTAGTCACC
ACCTTTATGC GCGATGGCGA AGAGTATGAT GTGATTGTGG AAGGGGAACG CAGTAACCAA
AATACCGCGG CCGATCTGCA AAATATCTAT GTTCGCTCTG AACGGACCAA GGAGTTGATC
CCACTGTCGA ACTTAGTAAC GGTCGAAGAG TTTGCCGATG CCAGCTCCCT TAACCGTTAT
AACCGTATGC GGGCGATCAC TATAGAAGCC AGCTTGGCGG ATGGTTATAG CCTAGGTGAG
GCGCTGGATT ACCTCAATCA GGTGGCGCGT GCTTATCTGC CTGCGGAAGC TGTGATCAGC
TACAAGGGAC AATCTTTGGA TTATCAAGAG TCTGGCAGCT CAATGTACTT TGTGTTCCTG
CTGGCGCTGG GGATTGTATT CCTAGTATTA GCGGCGCAGT TCGAAAGCTA TATTCACCCT
ATGGTGATCA TGCTGACGGT ACCGCTGGCC ACGGTTGGCG CCTTGATTGG GCTGTGGTTT
ACGGGCCAGA GTCTCAATAT CTACAGCCAG ATTGGGATTA TTATGCTGGT GGGCCTTGCG
GCGAAAAACG GTATTCTTAT CGTCGAATTT GCCAACCAGT TGCGGGATAA GGGCGTCGAT
TTCGACCGCG CCATTATTCA AGCCTCTTGT CAGCGTTTAC GCCCCATCCT AATGACGGGG
ATTACCACTG CCGCAGGCGC AGTACCTCTG GTATTGGCCG CTGGTGCGGG GGCGGAAACC
CGCTTCGTGA TTGGTGTGGT GGTGCTTTCG GGCATTATGC TGGCGACCTT GTTCACTATC
TTTGTGATCC CAACCGCCTA CGGTCTCTTT GCCCGTAACA GCGGTTCGCC AGAAGCGATT
GCCCAGCAAT TAGATAAGGA GTTGGCGCAG GATTAA
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| Protein sequence | MILTDLSVKR PVFASVISLL LVAFGLVAFD KLPLREYPNI DPPIVSIETN YRGASAAVVE
SRITQLIEDR ISGVEGIRHV SSSSSDGRSQ VTLEFDISRN IEDAANDVRD RISGLLDNLP
EEADPPEVQK ANGGDEVIMW LNLVSDQMTT LELTDYTRRY LSDRLSVVDG VSMIRIGGGK
VYAMRVWLDR QALASRSLTV ADVEAALRAE NVELPAGSLE SKERHFTVRL ERSYRTAEDF
ANLVISQGED GYLVKLGDVA KVEIGSEEER IMFRGNKEAM IGLGVSKQST ANTLEVARAV
NALVDKINPT LPAGMSIKRS YDSSVFIEAS IKEVYQTLFT AMVLVIIVIY LFLGSVRAML
IPAITVPVSL LGTFIVLYAL GYTINLLTLL AMILAIGMVV DDAIVMLENI HRRIEEGDSP
LKAAFLGARE VAFAVIATTL VLVAVFMPIT FLEGDLGKLF KEFAVAMSAA VIFSSIVALT
LSPMMCSKLL KPASQDSWLV RKVDSIMTGI SRGYQSSLEK AMARPVLMSI LVLIALGSSV
LLAQKVPQEF APQEDRGSLF LMVNGPQGAS YEYIESYMNE VENRLMPLVD SGDIKRLLIR
APRGFGRAAD FSNGMAIIVL EDWGQRRPMK EVIGDINKRL ADLAGVQAFP VMRQAFGRGV
GKPVQFVIGG PSYEELARWR DIMMEKAAEN PKLLGLDHDY KETKPQLRVV IDRDRAASLG
VSISNIGRTL ESMLGSRLVT TFMRDGEEYD VIVEGERSNQ NTAADLQNIY VRSERTKELI
PLSNLVTVEE FADASSLNRY NRMRAITIEA SLADGYSLGE ALDYLNQVAR AYLPAEAVIS
YKGQSLDYQE SGSSMYFVFL LALGIVFLVL AAQFESYIHP MVIMLTVPLA TVGALIGLWF
TGQSLNIYSQ IGIIMLVGLA AKNGILIVEF ANQLRDKGVD FDRAIIQASC QRLRPILMTG
ITTAAGAVPL VLAAGAGAET RFVIGVVVLS GIMLATLFTI FVIPTAYGLF ARNSGSPEAI
AQQLDKELAQ D
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