| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2327 |
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| Symbol | |
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| ID | 4252898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2776468 |
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| End bp | 2777172 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118952 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_734455 |
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| Protein GI | 113970662 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.409856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAC TCAATAAAGT CGTCAGCAGC TATGAAGAAG CGTTAGCAGG TTTATCCGAT
GATATGACCA TTATGGTTGG CGGTTTTGGC CTGTGCGGTA TTCCTGAAGG CTTAATCAAT
CAAATGGTTA AGATGGGCGT TAAGGGCTTA ACCGCCATTT CAAACAACGC TGGTGTGGAT
GATTTCGGTC TGGGCTTATT GTTAAAACAC CGCCAGATTT CGACCATGAT CGCCTCCTAC
GTCGGTGAGA ACGCCACCTT CGAACAGCAA ATGCTCTCGG GCGAACTGAA TGTGATTTTA
ACGCCGCAGG GCACGCTGGC GGAAAAAATC CGCGCGGGCG GCGCAGGTAT TCCAGCATTC
TTTACCGCCA CAGGCTACGG CACCCCCGTG GCGGAAGGTA AAGAAACCCG TGAAATCAAA
GGCCGTCACT ATGTGTTAGA AGAGTCTCTA ACTGCCGATT TTGCCCTCGT TCGCGCCTGG
AAGGCCGATA CTATGGGTAA CTTAGTGTTC CGCAAAACCG CCGCTAACTT TAACCCTATG
ATGGCGACTG CGGGCAAAAT CACGGTAGTG GAAGCCGAGT TTATTGTGGA GCCGGGCGAG
CTCGATCCTG ATCATATCCA TACTCCCGGC ATTTATGTTG ATCGCGTCAT CCAAGGCAAG
TTCGAGAAAC GTATCGAGCA GCGCACGGTA AAAGCGGCGA AATAA
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| Protein sequence | MAGLNKVVSS YEEALAGLSD DMTIMVGGFG LCGIPEGLIN QMVKMGVKGL TAISNNAGVD
DFGLGLLLKH RQISTMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV AEGKETREIK GRHYVLEESL TADFALVRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEFIVEPGE LDPDHIHTPG IYVDRVIQGK FEKRIEQRTV KAAK
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