| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2317 |
|---|
| Symbol | |
|---|
| ID | 4252888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2763493 |
|---|
| End bp | 2764239 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638118942 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_734445 |
|---|
| Protein GI | 113970652 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3658] Cytochrome b |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0816161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATC AACAGCCAAC ATCAATCGAA ATGCAATCAT ATCGGGTATG GGACAGACCT
ACCCGCCTCT TTCATTGGAT CAATCTTATT CTTGTGCTCG CCATGCTCAT CATTGGAGGC
ATGATGATGT TTCGCAGTGA CTTAGGCATT ACCGAACTCT CCGGTAAAAT CGGGCTTAAA
ACCCTGCATG TCATCATTGG CTATGCCTTT GCGATTAATT TACTTATGCG TTTAGTGTGG
GGGTTTATGG GCAATAAATA CGCCCGCTTT AGCCATATGT TCCCCGATGC CAATAGCAAG
GCCGAGTTAC AAACCTATAA AGCAGAACTT GCCGCGGGTA AAAATCCCCA ATACCTAGGC
CACAATCCTA AGGGAAAATT TGCCGTACTC GCCATCATGC TCTTATTGAT CACCATAATG
GCGACAGGCC TAATTCGCGC TGGCACAGAT ATTTACTATC CACCGCTCGG CAGCACAGTA
CAACAGTATT TAGCGGCAGC GAATGTTGAC CCGAGTAGTT TAAAACCCTA CGATGCCACA
GGCGTAGATA CAGATAAAGC CAATGCCATC AAGCCCATGA AGGGACTGGC CGGTGAAGTC
CACGTATACG CAGTGTACTT ATTAATGCTC CTTATCGTGC TGCATGTGTT TGCGGTGATT
TACACCGAAA TCAAACGCCA ACCAGGGATC ATTTCGGCCA TGTTTTCCGG TAATAAACTG
ATCCAAGGGC AGCCGAAGGA CGAGTAA
|
|---|
| Protein sequence | MPNQQPTSIE MQSYRVWDRP TRLFHWINLI LVLAMLIIGG MMMFRSDLGI TELSGKIGLK
TLHVIIGYAF AINLLMRLVW GFMGNKYARF SHMFPDANSK AELQTYKAEL AAGKNPQYLG
HNPKGKFAVL AIMLLLITIM ATGLIRAGTD IYYPPLGSTV QQYLAAANVD PSSLKPYDAT
GVDTDKANAI KPMKGLAGEV HVYAVYLLML LIVLHVFAVI YTEIKRQPGI ISAMFSGNKL
IQGQPKDE
|
|---|
| |