Gene Shewmr4_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2314 
Symbol 
ID4252885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2760168 
End bp2760524 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID638118939 
Producthistidine triad (HIT) protein 
Protein accessionYP_734442 
Protein GI113970649 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.409498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG AAACCATTTT CAGCAAAATT ATCCGCCGCG AAATTCCCGC CGACATCCTG 
TATCAAGACG AGCTGGTGAC CGCATTTAGA GACATCTCAC CAAAGGCGCC AACCCATATT
CTGATTGTGC CGAATCATTT GATCCCAACT GCAAATGATA TGAAAGCCTC GGATGAACCT
GCACTCGGCC GGATGATGAC AGTGGCGGCT AAACTGGCGG CAGAGGCGGG GATTGCCAAA
GATGGTTATC GTTTGATCAT GAACTGCAAC AAACATGGCG GACAAGAAGT GTACCATATC
CATATTCATC TCGTTGGCGG AGAGCCACTG GGACCCATGT TGAGCCAAGG TCAATGA
 
Protein sequence
MAEETIFSKI IRREIPADIL YQDELVTAFR DISPKAPTHI LIVPNHLIPT ANDMKASDEP 
ALGRMMTVAA KLAAEAGIAK DGYRLIMNCN KHGGQEVYHI HIHLVGGEPL GPMLSQGQ