Gene Shewmr4_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2305 
Symbol 
ID4252876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2752099 
End bp2752707 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content49% 
IMG OID638118930 
ProductDoxX family protein 
Protein accessionYP_734433 
Protein GI113970640 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0149049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGAT TGCCCATGTC CCTTGTTAAC CTTTATCAAA AATTCCTCAA TGCGAGCCGT 
TATGGTGAGG GGCTTGCCCC CTTAGCCCTT AGGCTGTATC TCGCGCCAGT GCTAATGCAA
GCTGGCTATA ACAAACTCGC GCACTTTGAA GACACTGTGG CTTGGTTTGC TAATCCCGAT
TGGGGATTGG GTTTACCTAT GCCGACGTTA ATGGCTGCCT TGGCGGCGGG CACTGAGTTT
TTTGGCGCAT TTTTATTACT CGTTGGCTTA GCGACGCGGC TGATTTCTAT CCCTTTGATG
ATAACCATGC TGGTGGCGGC GTTTACTGTG CATTGGCCTA ATGGTTGGTT GGCGATTGCC
GATGGCAGTT CATGGCTCGC CAATGAGCGG GTGCTCGATG CGGGTGATAA GCTGGATAAG
GCCAAATCCC TGTTGCAGGA ATACGGCAAT TACGATTGGT TGACCAGCTC GGGTAACTTG
GTGGTGCTGA ATAATGGCAT TGAGTTCGCA GCGACCTATT TTATTATGTT GCTGGCACTC
TTTAGCCTAG GAGGCGGGCG TTATACCAGT CTCGATTACT TTATCGCGAA GTGTTATAAC
GTAAAGTAA
 
Protein sequence
MLRLPMSLVN LYQKFLNASR YGEGLAPLAL RLYLAPVLMQ AGYNKLAHFE DTVAWFANPD 
WGLGLPMPTL MAALAAGTEF FGAFLLLVGL ATRLISIPLM ITMLVAAFTV HWPNGWLAIA
DGSSWLANER VLDAGDKLDK AKSLLQEYGN YDWLTSSGNL VVLNNGIEFA ATYFIMLLAL
FSLGGGRYTS LDYFIAKCYN VK