Gene Shewmr4_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2304 
Symbol 
ID4252875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2751422 
End bp2751970 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID638118929 
Productnitroreductase 
Protein accessionYP_734432 
Protein GI113970639 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0131618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCTA TCGAACTTTT ACTCACCCGC CAATCCACTC CAAGATTAAC CGCGCCTGCG 
CCCAACGAGC ATGAGCTTAA AATCATTTTA GATGCGGCGA TTCGAGTGCC AGATCATGGC
GCCTTAGCAC CGTGGGAATT TATTATTGCC ACAGGCCAAG GGTTAGACAC CTTAGCAGAT
ATCTATGTTA ACGCGGCCAA AGCCAGCGGC GCCGATGAAG ATTTTATCAA TAAAGCCAGA
GGGATGCCGA TGCGCGCTCC TATGGTGATT ACAGTTGTGG CGAAAACCCA ACAGCACCCT
AAAGTGCCAG TGCTTGAGCA GCAAATCGCT GCGGGCTGCG CCACAATGGC GATGCAGCAA
GCGGCATTCG CGCTAGGATT AGGCGCTGTG TGGCGCACCG GGGATTTTGC CTTCGACGCC
AACGTGAATA CGGCATTAGG CTTAGCGCCA GAGGATCAAA TCGTCGGCTT TTTATACGTG
GGCACCCCAG CGGTAGCCGC ACCGAAAAAA CCGCAAAAGG ATGGCAGCCA GTACGCCCGC
TACCTATAA
 
Protein sequence
MDAIELLLTR QSTPRLTAPA PNEHELKIIL DAAIRVPDHG ALAPWEFIIA TGQGLDTLAD 
IYVNAAKASG ADEDFINKAR GMPMRAPMVI TVVAKTQQHP KVPVLEQQIA AGCATMAMQQ
AAFALGLGAV WRTGDFAFDA NVNTALGLAP EDQIVGFLYV GTPAVAAPKK PQKDGSQYAR
YL