| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2302 |
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| Symbol | |
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| ID | 4252873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2748563 |
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| End bp | 2750791 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118927 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_734430 |
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| Protein GI | 113970637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000226304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAC TAAGCCTAAA ATCACAGGCC CTTAACGCGC GCACACTCAA ACCACACGCT
ATTAAACTGA CCTTTAGCGC CATCACGCTC GCCCTCGCCT TAAGTGGCTG CAGCGCACAG
CACAGCGATA CTGCGGCGCA GGCGACAGTC GCACCGAATG CGATGTCGGC GCAGATCATC
AGCCAAAATG CCAGCAACCC ATTCTTTAAA CCCTATGATA CGTTTATGGA AATTCCGGCC
TTCGACAAGA TTAAGCCTGA GCATTTCCTC CCTGCATTTA AGGCGGGTAT CGCCCAGCAA
CACGAAGAAA TTCAAGCGAT TGTCGATAAC AAAGACAAGC CTACCTTCGC CAATACCATC
GAAGCAATGG AATTTTCGGG CGATCTCGTT ACCCGCGTAT CCAACGTCTT CTTTAACTTA
ACTGGCGCGG ATACCACTCC TGAGCTGCAA GCTATTTCCA AGGAAGTCTC GCCGATGTTA
TCGTCTGCCG AAGACGATAT CTTATTGAAC GATAAACTAT TTCAACGTGT TAAAGCCGTT
TATGACAGCA AAGGCAGCCT AAAGCTCAAC ACGGCGCAGG CCAAATTACT CGAAGACACC
TATAAGTCGT TCACCCGTGG CGGTGCTAAC CTCAGCGAGC AGGATAAAAC CAAGCTGCGC
GCCCTGAATG AAGAAATCGG CAAGCTTAAC TTAGCCTTTG GTGACAATCT GTTAGCCGAA
ACCAATGCCT TCGAGCTGGT GATTGATAAG CAAGCTGACC TGTCTGGTTT ACCCGCCGAT
GTGATTGCCA CTGCCGCCGA AACCGCGAAA AAGCGTGGCC ATGAAGGCAA ATGGGTATTT
ACTACATCAC GCCCATCTAT CACGCCGTTT TTAACCTATG CCGATAATCG CGAGTTACGC
GAAAAGCTCT ATAAGGGTTA TATCGAGCGC GGTAACAACA ATAATGCCAA TGATAACAAA
GTCATTCTGG CAAAAATTGC CGCACTGCGC GCCGAACGTG CACAGCTCAT GGGCTATAAA
ACCCATGCAG ATTTTGTGTT AGAAGAGCGC ACCGCCAAGA CACCAGAAAA TGTCTATGGC
TTACTCAATA AAGTCTGGCC AGCAGCCCTT GCCCAAGCCA AGGCCGAAGT TGCGGATATG
CAGGCATTAA TCGACAGCCA AGGCGGCAAG TTTAAGCTGC AAGCTTGGGA TTGGGATTAC
TACGCCGACA AAATCCGTGT CGCGAAGTAC AGCTTTAACG AGCAGCAAAC TCGCCCTTAC
TTCTCCCTCG ACAGCACTTT AAAAGGCGTG TTCTATACGG CCAATCGCCT CTATGGCTTA
ACCTTTAAAG AACGTACTGA CTTACCTAAA TACAACCCAG AAGTACGTAC TTGGGAAGTG
TACGATAAAG ACGGCAAGCT TATGGCCATC TTTATGGGCG ACTATTTTAC CCGTGATAGC
AAACGCGGCG GCGCCTGGAT GAACTCGTTC CGCAAGCAAT ACCATATGAA TGGTGTCGAT
TCGAAACCCA TTATTGTCAA CGTGTTGAAC TACCCTCGCC CAGCGGGTAA TGAGCCTGCG
TTACTCACCT TCGATGAAGC CAGCACCCTG TTCCATGAGT TTGGCCATGC GCTCCACGGC
ATGTTATCCA ATGTCGAATA TCGCTCTCAA GGCGGAACGG CAGTACCTCG CGACTATGTA
GAGTTCCCTT CACAGGTCAA CGAAAACTGG ATGACTCAGC CTGAAGTGCT CGCGCAATTT
GCTAAGCACT ACAAAACTGG TGAAGTAATC CCGCAGGAAC TGGTGAAAAA AATCCAAGCC
GCCAGCAAAT TCAACCAAGG CTTTGCGACC GTTGAATATA TGGCCGCCAC TAAGCTCGAT
TTAGATTGGC ACACCCTAAC CGATACCACG CCTAAGGATG CCGCCAAGTT TGAGGCCGAC
TCCTTAGCCG CCATGGGATT GATTAATGAG ATCAGCCCAC GTTACCGCAG CACTTACTTC
TCGCATATCT TCGCGGGCGG TTATTCTGCT GGGTACTACA GCTACCTCTG GTCTGATATT
TTAGGTGCCG ATGCCTTCGA AGCCTTTAAA GAAAATGGCA TTTTCGATAA AGCGACAGCC
GATGCCTTCC GTAACAACAT CTTGTCTAAG GGTGGCAGTG ATGACCCTAT GCTGATGTAT
AAAAACTTCC GTGGTAAAGA AGCTGGCATT GAGCCACTGC TACGTAGTCG TGGTCTGTTA
GCGGAGTAA
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| Protein sequence | MKGLSLKSQA LNARTLKPHA IKLTFSAITL ALALSGCSAQ HSDTAAQATV APNAMSAQII
SQNASNPFFK PYDTFMEIPA FDKIKPEHFL PAFKAGIAQQ HEEIQAIVDN KDKPTFANTI
EAMEFSGDLV TRVSNVFFNL TGADTTPELQ AISKEVSPML SSAEDDILLN DKLFQRVKAV
YDSKGSLKLN TAQAKLLEDT YKSFTRGGAN LSEQDKTKLR ALNEEIGKLN LAFGDNLLAE
TNAFELVIDK QADLSGLPAD VIATAAETAK KRGHEGKWVF TTSRPSITPF LTYADNRELR
EKLYKGYIER GNNNNANDNK VILAKIAALR AERAQLMGYK THADFVLEER TAKTPENVYG
LLNKVWPAAL AQAKAEVADM QALIDSQGGK FKLQAWDWDY YADKIRVAKY SFNEQQTRPY
FSLDSTLKGV FYTANRLYGL TFKERTDLPK YNPEVRTWEV YDKDGKLMAI FMGDYFTRDS
KRGGAWMNSF RKQYHMNGVD SKPIIVNVLN YPRPAGNEPA LLTFDEASTL FHEFGHALHG
MLSNVEYRSQ GGTAVPRDYV EFPSQVNENW MTQPEVLAQF AKHYKTGEVI PQELVKKIQA
ASKFNQGFAT VEYMAATKLD LDWHTLTDTT PKDAAKFEAD SLAAMGLINE ISPRYRSTYF
SHIFAGGYSA GYYSYLWSDI LGADAFEAFK ENGIFDKATA DAFRNNILSK GGSDDPMLMY
KNFRGKEAGI EPLLRSRGLL AE
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