Gene Shewmr4_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2298 
Symbol 
ID4252869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2742742 
End bp2743167 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content45% 
IMG OID638118923 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_734426 
Protein GI113970633 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.622253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTT GTAAACTGAA AGGTCGCTGT CATTGTGGCA ATATCACCGC TGATATTGAA 
CTCACCTCAC CACCCGCAGC ATTAAATCCT CGCGCATGTG ATTGCGATTT CTGCCGTGAA
CATGGTGCTG CTTACATTTC CGACCCTAAA GGCAAACTCA CTCTCTCTGT GAATGAACCT
TCTTTGTTAG GCCGATATCA TCAAGGCAGT GGTACTGCTG ATTTTCTCTT TTGTCGTCAA
TGCGGCGTAT TAGTCGGTGT GTCTTTTCAA CAAGCTCAAA ATATTTACGC CACCATCAAT
GCGAATATCA TCAAAGAGGC TGGTTTTGGT GATACCTGTT CTGCGTCTCC CAAGAAACTC
TCCACCGCTG AAAAAATTGC GCGTTGGCAA GCGGTTTGGT TTTCTGATGT TCGCATTAAC
GCATAG
 
Protein sequence
MSVCKLKGRC HCGNITADIE LTSPPAALNP RACDCDFCRE HGAAYISDPK GKLTLSVNEP 
SLLGRYHQGS GTADFLFCRQ CGVLVGVSFQ QAQNIYATIN ANIIKEAGFG DTCSASPKKL
STAEKIARWQ AVWFSDVRIN A