| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2293 |
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| Symbol | |
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| ID | 4252864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2735119 |
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| End bp | 2736522 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118918 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_734421 |
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| Protein GI | 113970628 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000112238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGACAC TTTTTTCGCC TTTATTGCCA GCAAGACAAA GCCATATCGC ACTGCTGTGC
GCAGGCATTA TCTACTGGCT AACCGGCGCC TTAGGCCAAA CGTTATTTAG CTTGCAACCT
GAGAATATCA CCTTGATTTG GCTGCCCTCC GGCATTGCCT TGGTGATGTT ACTCATGTGG
GGGCGTAAGG CATTGGTGCT GATATTCCTC GGCAGTTTTA CCTTGAATTT TCAAGGTATG
TTACAACAGG ACTCCCTTGG TCTTTCGCTG CTGCATACTT CGATTGCTGC GTTAAGCGAT
ATGCTCGCGC CTGCGATGTC GATGTTGTTA CTCAGACGCT TCTTGCCACA GGGGACGGGA
AGTGCGAATG ACTTGATGAA GTTTGTGGTG GTCGCAGGCA TCATCCCCAT TTTCGGCTCC
AGCGCATTGT TATCCGCTAA CTTAGTGCTT GGCGGTTATA TTTTACCCAG CGCGTTTTGG
AGTATGGGGC AAATGTTTTT CTTTGCCGAT ATTCTGGGCA TAGTGTTGGT GTATCAGCTG
TATGCCGGAT GGGTGGAACC CAATGCGCTA AGCATAGCCA AAACCCGCCA TATCCTTTTG
CCCTTGATTG GCTTGCCACT GTTTTGTTTG GTTGGGGTTA AGTTCGATCT GGGCTGGTTA
TTTTATGTGA TCCCGCCGCT GTTGGTTGTG CTCTCCTTTG AGGTCACTCG CTTTTACCTC
GCACTGTTTA GCAGCGCCTC CATGCTGTTT ATGATTTTAG CGACAGCTCA GGGCTATGGT
CCGTTTATCA ATGCCACGCC GTATCAAACC AATGCGGAGA TGATGGCTTT TGTGTTGTCA
TCGGCATTAA CCATTTTTGG GGTGTCGTTA CAACGGGCAC AGCTGCGCCG AACCGAGAGA
GATAAGCAGA CCGCGGTGCA AGAGGCGCTC TATGATCCCT TGTCGGGGCT ACTGAATCGC
CGCGGCTTTA TGCCACAGCT GACAAATCTT AATGGCCCGA CAGCGCGTTA TTCGGTCGCT
ATGTTGGATC TCGATAACTT TAAGATGATT AACGACACCT ATGGTCACAG TGTGGGCGAT
AGGGTCATCC AGCTGTTGGC GCAGTTGATA CACAATCATA GCCGTAGCCA AGATATTGCC
GCGCGCCTAG GCGGTGAAGA GTTCGCCCTT GTGCTAAGGG ATATTGATGC CGAGCAGGTG
TATCCCGTGC TTGAGCGTAT TCGAAAATCC TTTGCTGAGA TGTCGATAGC AGCCGAGGAG
CACACGATTT ACTGCACTGT GAGCATTGGT TGGGTGGAGT ATCAGCAAGG TATCGCTGGC
GAGTCGTTGC TGCATTTGGC GGACAAGGCT TTATATCAAG CTAAGGCACA GGGCAAAAAC
ACGATTGTAA AGTATCAAGC TTAA
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| Protein sequence | MKTLFSPLLP ARQSHIALLC AGIIYWLTGA LGQTLFSLQP ENITLIWLPS GIALVMLLMW
GRKALVLIFL GSFTLNFQGM LQQDSLGLSL LHTSIAALSD MLAPAMSMLL LRRFLPQGTG
SANDLMKFVV VAGIIPIFGS SALLSANLVL GGYILPSAFW SMGQMFFFAD ILGIVLVYQL
YAGWVEPNAL SIAKTRHILL PLIGLPLFCL VGVKFDLGWL FYVIPPLLVV LSFEVTRFYL
ALFSSASMLF MILATAQGYG PFINATPYQT NAEMMAFVLS SALTIFGVSL QRAQLRRTER
DKQTAVQEAL YDPLSGLLNR RGFMPQLTNL NGPTARYSVA MLDLDNFKMI NDTYGHSVGD
RVIQLLAQLI HNHSRSQDIA ARLGGEEFAL VLRDIDAEQV YPVLERIRKS FAEMSIAAEE
HTIYCTVSIG WVEYQQGIAG ESLLHLADKA LYQAKAQGKN TIVKYQA
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