| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2292 |
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| Symbol | |
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| ID | 4252863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2733885 |
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| End bp | 2734925 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118917 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_734420 |
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| Protein GI | 113970627 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000761177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCG AACTCAATCC ACTGGGCTTA CTCGGTATCG AATTTACCGA ATTTGCAAGC
CCCGATAGCG ATTTTATGCA CAAAGTGTTT ATCGACTTTG GTTTTTCACT GCTGAAAAAA
GCCAAAAATA AAGACATTTT GTACTACAAA CAAAATGACA TTAACTTCCT GCTCAATAAT
GAGCGCGAAG GGTTTTCAGC AGAATTTGCC AAATCCCACG GCCCTGCTAT TAGCTCTATG
GGCTGGCGCG TAGAAGATGC CAGCTTTGCT CACCGTGTGG CGGTAGAGCG CGGCGCCAAA
GCCGTGGCTG ATTCGGCCAA GGATCTGCCT TATCCAGCCA TTTATGGTAT TGGTGACAGC
TTAATTTATT TTATCGACAC CTTCGGTGCC GACAACAATA TCTATGCAAC TGACTTTGAA
GACTTAAGTG AGCCTGTGAT CACTCAAGAG AAAGGCTTTG TCGAAGTAGA CCACTTAACC
AATAACGTCT ACAAAGGCAC CATGGAACAT TGGGCGAACT TCTACAAAAA CATCTTTGGT
TTTACCGAAG TGCGCTATTT CGACATCAGC GGCGTACAAA CCGCATTGGT GTCTTACGCC
CTGCGCTCAC CCGATGGCAG CTTCTGTATC CCGATTAACG AAGGTAAAGG CAACGATAAG
AACCAAATCG ATGAATACCT GAAGGAATAC AATGGTCCAG GTGTACAACA CTTAGCCTTT
AGAAGCCGTG ATATCGTTAA ATCCTTGGAT GCGATGGAAG GTAGCTCGAT TCAATGCTTG
GATATTATTC CCGAATATTA CGACACCATT TTCGATAAAG TCCCACAAGT GACCGAAAAC
CGTGAGCGTA TCAAGCATCA CCAAATTTTG GTGGACGGCG ACGAGTCAGG CTATTTATTA
CAGATCTTCA CTAAAAACCT GTTTGGCCCG ATCTTTATCG AAATCATTCA ACGTAAGAAC
AACTTAGGTT TTGGCGAAGG TAACTTCACC GCCCTGTTCC AATCGATTGA ACGTGACCAA
ATGCGCCGCG GCGTGCTGTA A
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| Protein sequence | MASELNPLGL LGIEFTEFAS PDSDFMHKVF IDFGFSLLKK AKNKDILYYK QNDINFLLNN
EREGFSAEFA KSHGPAISSM GWRVEDASFA HRVAVERGAK AVADSAKDLP YPAIYGIGDS
LIYFIDTFGA DNNIYATDFE DLSEPVITQE KGFVEVDHLT NNVYKGTMEH WANFYKNIFG
FTEVRYFDIS GVQTALVSYA LRSPDGSFCI PINEGKGNDK NQIDEYLKEY NGPGVQHLAF
RSRDIVKSLD AMEGSSIQCL DIIPEYYDTI FDKVPQVTEN RERIKHHQIL VDGDESGYLL
QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFQSIERDQ MRRGVL
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