| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2291 |
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| Symbol | |
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| ID | 4252862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2732611 |
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| End bp | 2733771 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118916 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_734419 |
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| Protein GI | 113970626 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000437513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTT ATGTGAAACA AGGCCAAGTC CCCCATAAGC GCCATATCGC ATTTGAGAAA
GAAAACGGCG AGCTATACCG TGAGGAGCTG TTTTCAACCC ATGGTTTTTC CAATATTTAC
TCGAATAAAT ATCACCACAA TATGCCGACT AAGGCCTTGG AAGTGGCACC CTACCGCCTC
GGTCACGGTG CCCAATGGGA AGATTCATTA GTTCAAAATT ATAAATTGGA CTCTCGTACG
GCCGATCGCG AAGGCAACTT CTTTAGCGCC CGCAATAAAA TCTTTTATAA CAATGATGTG
GCCATTTATA CCGCAAAAGT GACTCAAGAC ACGCCGGAGT TTTACCGCAA TGCCTACGCC
GATGAAGTGG TGTTTGTACA TGAAGGTGAA GGTACGCTCT ACAGTGAATA TGGCACTCTA
GAGATCAAGA AATGGGACTA CTTAGTGATC CCACGCGGCA CCACACATCA GCTCAAATTC
AACGATTACA GTAATGTGCG CTTATTTGTG ATTGAAGCCT TTTCAATGGT GGAAGTGCCA
AAACATTTCC GTAATGAATA CGGTCAGTTA CTCGAGTCTG CACCCTATTG TGAACGCGAT
ATACGCACGC CCGTATTGCA AGATGCCGTG GTTGAACGTG GCGCCTTCCC GCTGGTGTGT
AAATTTGGTA ATAAGTACCA ACTGACTACC TTAGAGTGGC ATCCCTTTGA CCTTGTGGGT
TGGGACGGCT GTGTTTACCC CTGGGCATTT AACATCACCG AATACGCACC TAAAGTCGGC
AAAATTCACT TACCGCCTTC AGACCACTTA GTGTTTACCG CCCACAACTT TGTGGTGTGT
AACTTTGTGC CGCGTCCTTA TGACTTCCAC GAGCGTGCCA TTCCTGCGCC TTACTATCAC
AACAATATTG ATAGTGATGA AGTGCTGTAC TACGTCGACG GCGACTTTAT GAGTCGCACA
GGGATTGAAG CCGGTTACAT CACCCTACAT CAAAAAGGGG TAGCGCACGG TCCACAACCC
GGCCGCACCG AAGCCTCGAT AGGCAAAAAA GAAACCTATG AATATGCAGT GATGGTGGAC
ACCTTCGCCC CACTGAAATT AACCGAACAT GTGCAAAATT GCATGAGTAA AGACTACAAC
CGCTCTTGGC TAGAAAACTA A
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| Protein sequence | MPFYVKQGQV PHKRHIAFEK ENGELYREEL FSTHGFSNIY SNKYHHNMPT KALEVAPYRL
GHGAQWEDSL VQNYKLDSRT ADREGNFFSA RNKIFYNNDV AIYTAKVTQD TPEFYRNAYA
DEVVFVHEGE GTLYSEYGTL EIKKWDYLVI PRGTTHQLKF NDYSNVRLFV IEAFSMVEVP
KHFRNEYGQL LESAPYCERD IRTPVLQDAV VERGAFPLVC KFGNKYQLTT LEWHPFDLVG
WDGCVYPWAF NITEYAPKVG KIHLPPSDHL VFTAHNFVVC NFVPRPYDFH ERAIPAPYYH
NNIDSDEVLY YVDGDFMSRT GIEAGYITLH QKGVAHGPQP GRTEASIGKK ETYEYAVMVD
TFAPLKLTEH VQNCMSKDYN RSWLEN
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