| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2288 |
|---|
| Symbol | |
|---|
| ID | 4252859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2730128 |
|---|
| End bp | 2730460 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118913 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_734416 |
|---|
| Protein GI | 113970623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000850131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TAACAGCAAC ACTGATAGGT GGAGTCGTAC TCAGTCTGGT CGCCCCGATA
GCGGCTTTTG CAAAGCACGA TAATGATAAG AAGGACAAAG ATCTGCCCCC TGGTCTACAA
AAGAAAGTCG ACAAGGGGCA GCCTCTTCCC CCTGGATGGC AGAAAAAACT GCGTCGTGGC
GATATCCTAG ATTACGATAT TTATGACCGC GGCCGCGTTG TCGTCCCCAT CGACAGAGAC
GGCAGAATCA GCATTGAAGT CGAAGGCTCC ATCATCAAGC TCGATGAAAA GAGCCGTAAG
ATCCTCGATA TCATCAATGT GGTCACCTAT TGA
|
|---|
| Protein sequence | MNKLTATLIG GVVLSLVAPI AAFAKHDNDK KDKDLPPGLQ KKVDKGQPLP PGWQKKLRRG
DILDYDIYDR GRVVVPIDRD GRISIEVEGS IIKLDEKSRK ILDIINVVTY
|
|---|
| |