Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2287 |
Symbol | |
ID | 4252858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2729586 |
End bp | 2730047 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638118912 |
Product | hypothetical protein |
Protein accession | YP_734415 |
Protein GI | 113970622 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000164575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACT GGCTTATGAA ATCGGAACCC GACGAATTTA GTATCGACGA TCTTAAGGCT TGCCCTAATC AAACCGAAGC CTGGTTTGGG ATCCGTAACT ACCAAGCACG TAACTTTATG CGAGATGCGA TGCAAATTGG CGATCAAGTC TTCTTTTACC ACTCAAGTTG CAAAGTCCCC GGCATCGTCG GCATTGCCGA AGTCGTGACC AATGCCTATC CTGACAGCTC GGCCTTTGAC CCCGAATCAA AGTATTTTGA TCCTAAGTCC GATCCACAGC AGCCACGATG GTTAAGGGTA GATATTCGTT TCGTCAAACA ATTTAAGGAA ATCATCCCCT TAAGTTTGAT CAAAAGTTTG CCGCAACTGG CCGATATGTA CTTAGTCTCT AAAGGTTCTA GGCTGAGCAT TCAACCTGTT ACCGAAGAAC AATGGCAAGC CGTGCTTATG CTCGCCCGCT AA
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Protein sequence | MNYWLMKSEP DEFSIDDLKA CPNQTEAWFG IRNYQARNFM RDAMQIGDQV FFYHSSCKVP GIVGIAEVVT NAYPDSSAFD PESKYFDPKS DPQQPRWLRV DIRFVKQFKE IIPLSLIKSL PQLADMYLVS KGSRLSIQPV TEEQWQAVLM LAR
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