Gene Shewmr4_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2282 
Symbol 
ID4252853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2724585 
End bp2725625 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID638118907 
Productzinc carboxypeptidase-related protein 
Protein accessionYP_734410 
Protein GI113970617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.548754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA CTCCCTTCGA AAACATTCCT TTTGAGTTAG ATACCTTATC GCAACTCATT 
GATACTCATT ATCTTAAGCT GAAATATCAG GTACTCGCTG ATATACCATT TCGGCACCAA
CATTTCCCAC TCTACAGCAT TGAGTTAGGG GTGACCGATA GACCTTGTCC AACTGTGTTA
TTTGTTGGTG GTGTGCATGG GGTGGAGCGG ATTGGTTCTC AGGTGGTTTT GGCCTTACTT
AACAGTCTGT TGCAGCGCCT TGCGTGGGAC AAACACCTAC AACAGTTATT AACGGACATT
CGCTTAGCCT TTGTACCTGT GGTGAATCCT GTCGGTTTGT TGCTGGGGAG CCGTGGTAAT
GGAAATCAGG TCGACTTGAT GCGTAACGCG CCGATAGAGT CCCGGGAAAA AGTCTCTTTT
ATGGTGGGCG GGCAGCGGTT ATCCTCTAAG CTGCCTTGGT TTCGTGGCCT TGGCGGCATG
GAGCTTGAAA CTGCGGGGCT GGTGGCCTAT GTGCAACAAC TGCTCAAACA AAGCACTAGT
CTGATTTCCC TCGATGCGCA TTCCGGCTTT GGTTTGACGG ATCATATTTG GTTTCCCTAT
GCCCATACAC GCGCATCCTT TGAAAACGCT CATTTTATTT TCCACTTAAA ACAATTGTTT
GAAGCCAGTT ATCCCCACCA TGGTCATTAT CGACTTGCCC CCCAGAGCCA GTTTTATCGC
ACCCACGGCG ATATTTGGGA TTACTTGTAC CGCCAGCATC ATACCCAGGA TCCTCAAGCG
AACATTCCCT TTTTACCTTT GACCTTAGAG ATGGGGTCAT GGGCATGGAT TAAGAAAAAT
CCAAGGCAAA TCTTCAATTT TGCGGGCTTT TTTAATCCGC AAAAAACACA CAGGCACCAC
AGAATTTTAC GTCGGCACAC AGTACTGATG CAGTTCTTGA TGGAGGCGGC GTACGCACGA
GAACTAGAAG GACTGACGCC TGAACATCTC ACACAATTGG CACTGAGTGC ACAGCAATTT
TGGTATCGGG AGAACTTGTG A
 
Protein sequence
MKNTPFENIP FELDTLSQLI DTHYLKLKYQ VLADIPFRHQ HFPLYSIELG VTDRPCPTVL 
FVGGVHGVER IGSQVVLALL NSLLQRLAWD KHLQQLLTDI RLAFVPVVNP VGLLLGSRGN
GNQVDLMRNA PIESREKVSF MVGGQRLSSK LPWFRGLGGM ELETAGLVAY VQQLLKQSTS
LISLDAHSGF GLTDHIWFPY AHTRASFENA HFIFHLKQLF EASYPHHGHY RLAPQSQFYR
THGDIWDYLY RQHHTQDPQA NIPFLPLTLE MGSWAWIKKN PRQIFNFAGF FNPQKTHRHH
RILRRHTVLM QFLMEAAYAR ELEGLTPEHL TQLALSAQQF WYRENL