Gene Shewmr4_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2280 
Symbol 
ID4252851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2723253 
End bp2723660 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content46% 
IMG OID638118905 
Producthypothetical protein 
Protein accessionYP_734408 
Protein GI113970615 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAT TACGGTTAAT TTTCAATATT GCTTGGTTTG TCCTTGGCGG ATTTGTGATG 
GGTCTTGCCT GGTGGCTTGC GGGAATTTTG TGTTTTATCA GTATTATCGG TATTCCCTTC
GGCAGAGCTT GTTTTGTTAT TGGTGAATTA ACCTTTTGGC CCTTTGGGCA GGAGCAAATG
AATCGCCGCC ATTTAACCGG ACGTGAGGAT TTAGGCACTG GCGCCTTCGG TATGGTCGGC
AATATTATTT GGTTCTTGCT GTTTGGGATT TGGTTGACCA TAGGTCATTT GGCCCATGCC
CTCGCCTGCT TTGTGACGAT TATTGGTATC CCCTTCGGGA TCCAACATAT CAAGCTGGCG
CTATTAAGCC TGACACCGAT TGGGCAAACC ATTGTAGCGA AAGCGTAA
 
Protein sequence
MSLLRLIFNI AWFVLGGFVM GLAWWLAGIL CFISIIGIPF GRACFVIGEL TFWPFGQEQM 
NRRHLTGRED LGTGAFGMVG NIIWFLLFGI WLTIGHLAHA LACFVTIIGI PFGIQHIKLA
LLSLTPIGQT IVAKA