| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2269 |
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| Symbol | |
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| ID | 4252840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2714036 |
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| End bp | 2715310 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118894 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_734397 |
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| Protein GI | 113970604 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B
[TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00964574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC TTGCCGCCAG TATCGCCGCG TGTGTGAGCT TAAGTGCGTG TTCGAGCGCG
CCAACCTCGA GCGGTAATAG TCAAACCGCG ATCGCCGAGA CGCAAGCCGC CGTGCAAGAA
ATGCAGCTTA GTGACACCAT TGCCGCCCAT GCTGAGGCAT TTCCTACCTG TGTGGCTAAC
CTACAGGAGC GCGCACGTAG TGAAGGCTTA TCTGAAGCCA CCATCAAGGA CACAGTCGCT
AGTTTGCAGT TTGTGCCTAA AGTGATTGAG CTTGACCAAG CTCAGCCCGA GTTTAGCCAA
ACCTTCAATA ATTATTTTAC CAAGCGGGCG ACCGATTGGC GGGTGAATGA AGGCCGCCGT
TTACTGAAAA AACACCGCGC GCTGCTCGAT AAATTGGCGC AGGAATACGG TGTGCCACCA
CAATATATTC TGTCTTTCTG GGGACTTGAG ACTAACTACG GTTCCTACAA AGGCAAAATG
TCCGTGTTAG ATTCTCTTGC TACCTTGGCC TGTGAGCCGC GTCGCAGTGG CTATTTTACG
ACTGAGCTAA TGCAAGCGCT TAAGTTAAAA GAAAAATACG GCTTTGATAA GAGCACTATG
GTGGGCTCTT GGGCCGGCGC CATGGGGCAC ACCCAGTTTA TGCCCTCGGC CTATGCAAAA
TATGCCATCG ATGGGGATGG CGACGGTAAG GCCGATTTGT GGAATAGCAC CGAAGATGCA
CTCACCTCGG CGGCGAACTT TTTGCAGCAC TTAGGCTGGC AACGCAATGA GCGTTGGGGG
CGTGAAGTGA TATTGCCGCG CAATTTCAGC TATGAAAACC TTGGCGCTAA ACAGGCGCAG
CCGCTATCCC AATGGGCGGC GCAATCCTTA GTGCAAAGTA ATGGTCAGCC TTTACCCGCT
ATCGATATGA AGGCGGCGCT GTATTTGCCC TCGGGTCATA CTGGTCCCGC GTTTTTAGGC
TATGAAAATT TCAATGTGAT CATGCGTTGG AACCGCTCTG AGTTTTACGC CATTACCGTT
GGTCATTTGG CCGATAGAAT TAATGGTGGC GAACCATTAA AAGTGGCACC GCCCGAGCAG
CCACGTTTGA GTCGTGAGCA AATCAAACAG TTACAAACCA AGCTGAATGA ATCAGGCTTC
GATGTCGGTA AACCCGATGG CGTACTTGGG CGTAACTCTT CGGCGGGGAT CCAAGCATTC
CAGCGCAGTA AGAATATGAT TGCCGACGGT TTCCCAAGCC CTGAAGTCTT TAGCGCATTG
GGGATTTCAC TCTAA
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| Protein sequence | MSYLAASIAA CVSLSACSSA PTSSGNSQTA IAETQAAVQE MQLSDTIAAH AEAFPTCVAN
LQERARSEGL SEATIKDTVA SLQFVPKVIE LDQAQPEFSQ TFNNYFTKRA TDWRVNEGRR
LLKKHRALLD KLAQEYGVPP QYILSFWGLE TNYGSYKGKM SVLDSLATLA CEPRRSGYFT
TELMQALKLK EKYGFDKSTM VGSWAGAMGH TQFMPSAYAK YAIDGDGDGK ADLWNSTEDA
LTSAANFLQH LGWQRNERWG REVILPRNFS YENLGAKQAQ PLSQWAAQSL VQSNGQPLPA
IDMKAALYLP SGHTGPAFLG YENFNVIMRW NRSEFYAITV GHLADRINGG EPLKVAPPEQ
PRLSREQIKQ LQTKLNESGF DVGKPDGVLG RNSSAGIQAF QRSKNMIADG FPSPEVFSAL
GISL
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